Literature DB >> 26231361

Epigenetic Signatures as Biomarkers of Exposure.

Christine Ladd-Acosta1.   

Abstract

To advance our knowledge of the influence of environmental exposures on human health and disease, robust studies are needed. However, for many exposures, robust studies are not feasible due to limitations with current ascertainment methods and/or study designs. Epigenetics, the study of mitotically heritable, reversible information that regulates critical cell processes, has gained much attention because it offers a potential mechanism to explain how exposures can influence cell states. Therefore, most studies have focused on epigenetics as a mechanism for disease. However, emerging evidence also suggests that epigenetic marks may also serve as biomarkers of exposure. Here, we highlight findings showing that the epigenome is labile to the environment and that these exposure-associated changes show long-term stability, are specific, are detectable in accessible tissues, can predict exposure status, and can be practically implemented, thus supporting the potential for epigenetic patterns to serve as robust measures of environmental exposure.

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Year:  2015        PMID: 26231361     DOI: 10.1007/s40572-015-0051-2

Source DB:  PubMed          Journal:  Curr Environ Health Rep        ISSN: 2196-5412


  69 in total

1.  Comprehensive high-throughput arrays for relative methylation (CHARM).

Authors:  Rafael A Irizarry; Christine Ladd-Acosta; Benilton Carvalho; Hao Wu; Sheri A Brandenburg; Jeffrey A Jeddeloh; Bo Wen; Andrew P Feinberg
Journal:  Genome Res       Date:  2008-03-03       Impact factor: 9.043

2.  Epigenetic vestiges of early developmental adversity: childhood stress exposure and DNA methylation in adolescence.

Authors:  Marilyn J Essex; W Thomas Boyce; Clyde Hertzman; Lucia L Lam; Jeffrey M Armstrong; Sarah M A Neumann; Michael S Kobor
Journal:  Child Dev       Date:  2011-09-02

3.  Cigarette smoking behaviors and time since quitting are associated with differential DNA methylation across the human genome.

Authors:  Emily S Wan; Weiliang Qiu; Andrea Baccarelli; Vincent J Carey; Helene Bacherman; Stephen I Rennard; Alvar Agusti; Wayne Anderson; David A Lomas; Dawn L Demeo
Journal:  Hum Mol Genet       Date:  2012-04-06       Impact factor: 6.150

4.  Prenatal arsenic exposure and the epigenome: altered microRNAs associated with innate and adaptive immune signaling in newborn cord blood.

Authors:  Julia E Rager; Kathryn A Bailey; Lisa Smeester; Sloane K Miller; Joel S Parker; Jessica E Laine; Zuzana Drobná; Jenna Currier; Christelle Douillet; Andrew F Olshan; Marisela Rubio-Andrade; Miroslav Stýblo; Gonzalo García-Vargas; Rebecca C Fry
Journal:  Environ Mol Mutagen       Date:  2013-12-10       Impact factor: 3.216

5.  Genomic DNA methylation among women in a multiethnic New York City birth cohort.

Authors:  Mary Beth Terry; Jennifer S Ferris; Richard Pilsner; Julie D Flom; Parisa Tehranifar; Regina M Santella; Mary V Gamble; Ezra Susser
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-09       Impact factor: 4.254

6.  Epigenome-wide association study in the European Prospective Investigation into Cancer and Nutrition (EPIC-Turin) identifies novel genetic loci associated with smoking.

Authors:  Natalie S Shenker; Silvia Polidoro; Karin van Veldhoven; Carlotta Sacerdote; Fulvio Ricceri; Mark A Birrell; Maria G Belvisi; Robert Brown; Paolo Vineis; James M Flanagan
Journal:  Hum Mol Genet       Date:  2012-11-21       Impact factor: 6.150

7.  Global levels of histone modifications in peripheral blood mononuclear cells of subjects with exposure to nickel.

Authors:  Adriana Arita; Jingping Niu; Qingshan Qu; Najuan Zhao; Ye Ruan; Arthur Nadas; Yana Chervona; Fen Wu; Hong Sun; Richard B Hayes; Max Costa
Journal:  Environ Health Perspect       Date:  2011-10-24       Impact factor: 9.031

8.  Association of global DNA methylation and global DNA hydroxymethylation with metals and other exposures in human blood DNA samples.

Authors:  Maria Tellez-Plaza; Wan-Yee Tang; Yan Shang; Jason G Umans; Kevin A Francesconi; Walter Goessler; Marta Ledesma; Montserrat Leon; Martin Laclaustra; Jonathan Pollak; Eliseo Guallar; Shelley A Cole; M Dani Fallin; Ana Navas-Acien
Journal:  Environ Health Perspect       Date:  2014-04-25       Impact factor: 9.031

9.  Bisphenol A-associated epigenomic changes in prepubescent girls: a cross-sectional study in Gharbiah, Egypt.

Authors:  Jung H Kim; Laura S Rozek; Amr S Soliman; Maureen A Sartor; Ahmed Hablas; Ibrahim A Seifeldin; Justin A Colacino; Caren Weinhouse; Muna S Nahar; Dana C Dolinoy
Journal:  Environ Health       Date:  2013-04-16       Impact factor: 5.984

10.  Differential DNA methylation in umbilical cord blood of infants exposed to low levels of arsenic in utero.

Authors:  Devin C Koestler; Michele Avissar-Whiting; E Andres Houseman; Margaret R Karagas; Carmen J Marsit
Journal:  Environ Health Perspect       Date:  2013-06-11       Impact factor: 9.031

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  38 in total

Review 1.  Dad's Snoring May Have Left Molecular Scars in Your DNA: the Emerging Role of Epigenetics in Sleep Disorders.

Authors:  Daniela Morales-Lara; Clelia De-la-Peña; Eric Murillo-Rodríguez
Journal:  Mol Neurobiol       Date:  2017-02-02       Impact factor: 5.590

Review 2.  Prenatal substance exposure and offspring development: Does DNA methylation play a role?

Authors:  Valerie S Knopik; Kristine Marceau; L Cinnamon Bidwell; Emily Rolan
Journal:  Neurotoxicol Teratol       Date:  2018-02-16       Impact factor: 3.763

3.  Air Pollution and the Epigenome: A Model Relationship for the Exploration of Toxicoepigenetics.

Authors:  Shaun D McCullough; Radhika Dhingra; Marie C Fortin; David Diaz-Sanchez
Journal:  Curr Opin Toxicol       Date:  2017-10-01

Review 4.  Early Life Exposures and Adult Cancer Risk.

Authors:  Megan A Clarke; Corinne E Joshu
Journal:  Epidemiol Rev       Date:  2017-01-01       Impact factor: 6.222

5.  Epigenetic Research in Neuropsychiatric Disorders: the "Tissue Issue".

Authors:  Kelly M Bakulski; Alycia Halladay; Valerie W Hu; Jonathan Mill; M Daniele Fallin
Journal:  Curr Behav Neurosci Rep       Date:  2016-08-02

6.  Cord blood buffy coat DNA methylation is comparable to whole cord blood methylation.

Authors:  John Dou; Rebecca J Schmidt; Kelly S Benke; Craig Newschaffer; Irva Hertz-Picciotto; Lisa A Croen; Ana-Maria Iosif; Janine M LaSalle; M Daniele Fallin; Kelly M Bakulski
Journal:  Epigenetics       Date:  2018-02-16       Impact factor: 4.528

7.  Cardenas et al. Reply to "DNA Methylation and Prenatal Exposures".

Authors:  Andres Cardenas; Sharon M Lutz; Todd M Everson; Marie-France Hivert
Journal:  Am J Epidemiol       Date:  2019-11-01       Impact factor: 4.897

8.  A Droplet Digital PCR Assay for Smoking Predicts All-Cause Mortality.

Authors:  Allan M Andersen; Philip T Ryan; Fredrick X Gibbons; Ronald L Simons; Jeffrey D Long; Robert A Philibert
Journal:  J Insur Med       Date:  2019-01-31

9.  Using DNA methylation to validate an electronic medical record phenotype for smoking.

Authors:  Kathleen A McGinnis; Amy C Justice; Janet P Tate; Henry R Kranzler; Hilary A Tindle; William C Becker; John Concato; Joel Gelernter; Boyang Li; Xinyu Zhang; Hongyu Zhao; Kristina Crothers; Ke Xu
Journal:  Addict Biol       Date:  2018-10-04       Impact factor: 4.280

10.  Presence of an epigenetic signature of prenatal cigarette smoke exposure in childhood.

Authors:  Christine Ladd-Acosta; Chang Shu; Brian K Lee; Nicole Gidaya; Alison Singer; Laura A Schieve; Diana E Schendel; Nicole Jones; Julie L Daniels; Gayle C Windham; Craig J Newschaffer; Lisa A Croen; Andrew P Feinberg; M Daniele Fallin
Journal:  Environ Res       Date:  2015-11-21       Impact factor: 6.498

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