Literature DB >> 26230858

Comparative analysis between saliva and buccal swabs as source of DNA: lesson from HLA-B*57:01 testing.

Raffaella Cascella1, Laura Stocchi1, Claudia Strafella1, Ivano Mezzaroma2, Marco Mannazzu3, Vincenzo Vullo4, Francesco Montella5, Giustino Parruti6, Paola Borgiani1, Federica Sangiuolo1, Giuseppe Novelli1, Antonella Pirazzoli7, Stefania Zampatti8,9, Emiliano Giardina1,8.   

Abstract

AIM: Our work aimed to designate the optimal DNA source for pharmacogenetic assays, such as the screening for HLA-B*57:01 allele. MATERIALS &
METHODS: A saliva and four buccal swab samples were taken from 104 patients. All the samples were stored at different time and temperature conditions and then genotyped for the HLA-B*57:01 allele by SSP-PCR and classical/capillary electrophoresis.
RESULTS: The genotyping analysis reported different performance rates depending on the storage conditions of the samples. Given our results, the buccal swab demonstrated to be more resistant and stable in time with respect to the saliva.
CONCLUSION: Our investigation designates the buccal swab as the optimal DNA source for pharmacogenetic assays in terms of resistance, low infectivity, low-invasiveness and easy sampling, and safe transport in centralized medical centers providing specialized pharmacogenetic tests.

Entities:  

Keywords:  DNA source; HLA-B*57:01 testing; hypersensitivity reaction; molecular assay; personalized medicine; pharmacogenetics

Mesh:

Substances:

Year:  2015        PMID: 26230858     DOI: 10.2217/pgs.15.59

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  6 in total

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Journal:  Neurogenetics       Date:  2019-03-25       Impact factor: 2.660

2.  Human DNA extraction from whole saliva that was fresh or stored for 3, 6 or 12 months using five different protocols.

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Journal:  J Appl Oral Sci       Date:  2017 Mar-Apr       Impact factor: 2.698

3.  Correlation between salivary and serum CA15-3 concentrations in patients with breast cancer.

Authors:  Daniele Xavier Assad; Elisa Cançado Porto Mascarenhas; Ana Gabriela Costa Normando; Hélène Chardin; Gustavo Barcelos Barra; Riccardo Pratesi; Yanna Karla de Medeiros Nóbrega; Ana Carolina Acevedo; Eliete Neves Silva Guerra
Journal:  Mol Clin Oncol       Date:  2020-06-04

4.  Bilateral Retinal Angiomatous Proliferation in a Variant of Retinitis Pigmentosa.

Authors:  G Aloe; C M De Sanctis; C Strafella; R Cascella; F Missiroli; M Cesareo; E Giardina; F Ricci
Journal:  Case Rep Ophthalmol Med       Date:  2019-07-31

5.  Comparative Analysis of ANDE 6C Rapid DNA Analysis System and Traditional Methods.

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Journal:  Genes (Basel)       Date:  2021-02-03       Impact factor: 4.096

  6 in total

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