Literature DB >> 26230393

Correction: Prevalence Study and Genetic Typing of Bovine Viral Diarrhea Virus (BVDV) in Four Bovine Species in China.

Mingliang Deng, Sukun Ji, Wentao Fei, Sohail Raza, Chenfei He, Yingyu Chen, Huanchun Chen, Aizhen Guo.   

Abstract

Entities:  

Year:  2015        PMID: 26230393      PMCID: PMC4521862          DOI: 10.1371/journal.pone.0134777

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


× No keyword cloud information.
The authors have prepared a revised manuscript to address comments left by readers regarding the species examined in this article as well as the classification of pestiviruses. Please view a revised manuscript provided as Supporting Information (S1 File), a revised Fig 2, and revised Supporting Information files S1 and S3 Tables here.
Fig 2

Phylogenetic analysis based on 5’-UTR (200 bp) and Npro (411 bp) sequences.

A phylogenetic tree of the 5’-UTR was created using the nucleotide sequences of representative BVDV-1 isolates from each province and 37 reference strains retrieved from the GenBank database (S3 Table) (A); Phylogenetic tree analysis of the Npro gene was created using the nucleotide sequences of 11 selected BVDV-1 samples in this study and 32 BVDV reference strains retrieved from the GenBank database (B). ◆, isolates from this study; ◇, M31182 (JQ799141). The GenBank accession numbers of the reference strains used for Npro analysis were as follows: SD-1 (M96751), Osloss (M96687), VEDEVAC (AJ585412), 519 (AF144464), DeerNZ1 (U80903), Shitara0105 (AB359926), F-Au (AF287284), NCP03 (AB359927), 3186V6 (AF287282), J-Au (AF287286), W-Au (AF287290), A-Au (AF287283), L-Au (AF287287), G-Au (AF287285), 23–15 (AF287279), DeerGB1 (U80902), KS86-1ncp (AB078950), B440-06 (EU224257), TR-27 (EU163975), TR-29 (EU163977), ZM-95 (AF526381), Shitara0206 (AB359930), IS25CP01 (AB359931), BJ0703 (GU120261), HB-1 (KC695812), TR70 (KF154779), 2561 (JQ920343), UM/136/08 (LN515612), SI/207/12 (LN515611), NY-93 (AF502399), and Hobi (AY735486).

Phylogenetic analysis based on 5’-UTR (200 bp) and Npro (411 bp) sequences.

A phylogenetic tree of the 5’-UTR was created using the nucleotide sequences of representative BVDV-1 isolates from each province and 37 reference strains retrieved from the GenBank database (S3 Table) (A); Phylogenetic tree analysis of the Npro gene was created using the nucleotide sequences of 11 selected BVDV-1 samples in this study and 32 BVDV reference strains retrieved from the GenBank database (B). ◆, isolates from this study; ◇, M31182 (JQ799141). The GenBank accession numbers of the reference strains used for Npro analysis were as follows: SD-1 (M96751), Osloss (M96687), VEDEVAC (AJ585412), 519 (AF144464), DeerNZ1 (U80903), Shitara0105 (AB359926), F-Au (AF287284), NCP03 (AB359927), 3186V6 (AF287282), J-Au (AF287286), W-Au (AF287290), A-Au (AF287283), L-Au (AF287287), G-Au (AF287285), 23–15 (AF287279), DeerGB1 (U80902), KS86-1ncp (AB078950), B440-06 (EU224257), TR-27 (EU163975), TR-29 (EU163977), ZM-95 (AF526381), Shitara0206 (AB359930), IS25CP01 (AB359931), BJ0703 (GU120261), HB-1 (KC695812), TR70 (KF154779), 2561 (JQ920343), UM/136/08 (LN515612), SI/207/12 (LN515611), NY-93 (AF502399), and Hobi (AY735486).

A revised version of the article.

(PDF) Click here for additional data file.

Proportion of samples tested by RT-PCR within each antibody category.

(DOCX) Click here for additional data file.

5’-UTR sequences of isolates and reference strains retrieved from GenBank.

(DOCX) Click here for additional data file.
  1 in total

1.  Prevalence study and genetic typing of bovine viral diarrhea virus (BVDV) in four bovine species in China.

Authors:  Mingliang Deng; Sukun Ji; Wentao Fei; Sohail Raza; Chenfei He; Yingyu Chen; Huanchun Chen; Aizhen Guo
Journal:  PLoS One       Date:  2015-04-07       Impact factor: 3.240

  1 in total
  4 in total

1.  Evaluation of the serum virome in calves persistently infected with Pestivirus A, presenting or not presenting mucosal disease.

Authors:  Matheus N Weber; Samuel P Cibulski; Simone Silveira; Franciele M Siqueira; Ana Cristina S Mósena; Mariana S da Silva; Juliana C Olegário; Ana Paula M Varela; Thaís F Teixeira; Matheus V Bianchi; David Driemeier; Saulo P Pavarini; Fabiana Q Mayer; Paulo M Roehe; Cláudio W Canal
Journal:  Virus Genes       Date:  2018-09-14       Impact factor: 2.332

2.  Survey for pestiviruses in backyard pigs in southern Brazil.

Authors:  Ana C S Mósena; Matheus N Weber; Samuel P Cibulski; Mariana S Silva; Willian P Paim; Gustavo S Silva; Antônio A Medeiros; Nathália A Viana; Letícia F Baumbach; Daniela E Puhl; Simone Silveira; Luis G Corbellini; Cláudio W Canal
Journal:  J Vet Diagn Invest       Date:  2020-01-10       Impact factor: 1.279

3.  First study on genetic variability of bovine viral diarrhea virus isolated from Sapera dairy goats with reproductive disorders in Yogyakarta, Indonesia.

Authors:  N Retno; H Wuryastuty; R Wasito; S H Irianingsih
Journal:  Vet World       Date:  2022-04-22

4.  Insights into the origin and diversification of bovine viral diarrhea virus 1 subtypes.

Authors:  Matheus N Weber; Jonas M Wolf; Mariana S da Silva; Ana Cristina S Mosena; Renata F Budaszewski; Vagner R Lunge; Cláudio W Canal
Journal:  Arch Virol       Date:  2021-01-03       Impact factor: 2.574

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.