| Literature DB >> 26228217 |
Zhi-Hua Li, Jie Han1, Yu-Fei Wang, Jun Dai, Hui Zhang, Chun-Xia Li, Qun Ma.
Abstract
OBJECTIVE: The interleukin-23 receptor (IL-23R) has been shown to be associated with autoimmune diseases in many different populations. This study aimed to investigate the association between IL-23R gene polymorphism and susceptibility to Hashimoto's thyroiditis (HT) in Chinese Han population of Shandong.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26228217 PMCID: PMC4717969 DOI: 10.4103/0366-6999.161362
Source DB: PubMed Journal: Chin Med J (Engl) ISSN: 0366-6999 Impact factor: 2.628
Clinical features and demographic characteristics of the study population
| Characteristics | HT group ( | Control group ( |
|---|---|---|
| Male/female, | 11/134 | 15/135 |
| Age, years, mean (range) | 38.02 (15–67) | 42.19 (18–63) |
| TSH, mIU/L, mean ± SD | 53.60 ± 30.94 | 2.01 ± 0.78 |
| FT4, pmol/L, mean ± SD | 2.85 ± 0.56 | 3.46 ± 0.64 |
| FT3, pmol/L, mean ± SD | 0.64 ± 0.06 | 0.95 ± 0.08 |
| Anti-TG, U/ml, mean ± SD | 931.46 ± 540.22 | <115 |
| Anti-TPO, U/ml, mean ± SD | 401.62 ± 229.56 | <10 |
| TRAb, ng/L, mean ± SD | 13.2 ± 3.77 | 12.1 ± 1.15 |
TSH: Thyroid stimulating hormone; FT4: Free thyroxine; FT3: Free triiodothyronine; Anti-TG: Anti-thyroglobulin autoantibodies; Anti-TPO: Anti-thyroid peroxidase antibodies; TRAb: Thyrotrophin receptor antibody; SD: Standard deviation.
Primers and restriction enzymes used for RFLP analysis of IL-23R gene
| SNPs | Primers | Restriction enzyme |
|---|---|---|
| rs17375018 | 5’-TTTTTCCCATCT | BsurI |
| TCTTTCTTAA-3’(forward) | ||
| 5’-CGCCCAGCCCT | ||
| CTTCTCTAATT-3’(reverse) | ||
| rs7517847 | 5’-CCTTTCACCTAT | Ec0147I |
| TCCCAAGGCC-3’ (forward) | ||
| 5’-GGGCCTAGGAG | ||
| ACAGCCCATAA-3’ (reverse) |
SNPs: Single nucleotide polymorphisms; RFLP: Restriction fragment length polymorphism.
Figure 1Restriction enzyme digestion results of rs17375018 and rs7517847. M: Generuler 50 bp deoxyribonucleic acid ladder; Lane 1, 4: rs7517847 TT genotype; Lane 2, 5: rs7517847 GG genotype; Lane 3, 6: rs7517847 TG genotype; Lane 7, 10: rs7375018 GG genotype; Lane 8, 11: rs7375018 AA genotype; Lane 9, 12: rs7375018 GA genotype.
Hardy–Weinberg genetic equilibrium test results of rs17375018 and rs7517847
| SNPs | Genotype allele | HT group | Control group | ||||
|---|---|---|---|---|---|---|---|
| Observed number | Theoretical value | Observed number | Theoretical value | ||||
| rs17375018 | AA | 6 | 7.51 | 0.476 | 16 | 15.36 | 0.810 |
| GA | 54 | 50.97 | 64 | 65.28 | |||
| GG | 85 | 86.51 | 70 | 69.36 | |||
| rs7517847 | TT | 51 | 51.60 | 0.836 | 53 | 54.60 | 0.585 |
| GT | 71 | 69.79 | 75 | 71.79 | |||
| GG | 23 | 23.60 | 22 | 23.60 | |||
HT: Hashimoto's thyroiditis; SNPs: Single nucleotide polymorphisms.
Frequencies of alleles and genotypes of IL-23R polymorphisms in HT patients and healthy controls
| SNPs | Genotype Allele | HT group, | Control group, | |||
|---|---|---|---|---|---|---|
| rs17375018 | AA | 6 (4.2) | 16 (10.7) | 0.626 (0.434–0.903) | ||
| GA | 54 (37.2) | 64 (42.7) | ||||
| GG | 85 (58.6) | 70 (46.6) | 6.762 | 0.034 | ||
| A | 66 (22.8) | 96 (32.0) | ||||
| G | 224 (77.2) | 204 (68.0) | 6.322 | 0.013 | ||
| rs7517847 | TT | 51 (35.2) | 53 (35.3) | 1.029 (0.740–1.430) | ||
| GT | 71 (49.0) | 75 (50.0) | 0.086 | 0.958 | ||
| GG | 23 (15.8) | 22 (14.7) | 0.028 | 0.867 | ||
| T | 173 (59.7) | 181 (60.3) | ||||
| G | 117 (40.3) | 119 (39.7) |
HT: Hashimoto's thyroiditis; SNPs: Single nucleotide polymorphisms; OR: Odds ratio; CI: Confidence interval.