Literature DB >> 26227036

In Vitro/In Vivo Production of tRNA for X-Ray Studies.

Clément Dégut1, Alexandre Monod, Franck Brachet, Thibaut Crépin, Carine Tisné.   

Abstract

tRNAs occupy a central role in the cellular life, and they are involved in a broad range of biological processes that relies on their interaction with proteins and RNA. Crystallization and structure resolution of tRNA or/and tRNA/partner complexes can yield in valuable information on structural organizations of key elements of cellular machinery. However, crystallization of RNA, is often challenging. Here we review two methods to produce and purify tRNA in quantity and quality to perform X-ray studies.

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Year:  2016        PMID: 26227036     DOI: 10.1007/978-1-4939-2763-0_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  Structural characterization of B. subtilis m1A22 tRNA methyltransferase TrmK: insights into tRNA recognition.

Authors:  Clément Dégut; Martine Roovers; Pierre Barraud; Franck Brachet; André Feller; Valéry Larue; Abdalla Al Refaii; Joël Caillet; Louis Droogmans; Carine Tisné
Journal:  Nucleic Acids Res       Date:  2019-05-21       Impact factor: 16.971

2.  Preparation of Yeast tRNA Sample for NMR Spectroscopy.

Authors:  Marjorie Catala; Alexandre Gato; Carine Tisné; Pierre Barraud
Journal:  Bio Protoc       Date:  2020-06-20

Review 3.  Recent Methods for Purification and Structure Determination of Oligonucleotides.

Authors:  Qiulong Zhang; Huanhuan Lv; Lili Wang; Man Chen; Fangfei Li; Chao Liang; Yuanyuan Yu; Feng Jiang; Aiping Lu; Ge Zhang
Journal:  Int J Mol Sci       Date:  2016-12-18       Impact factor: 5.923

4.  Time-resolved NMR monitoring of tRNA maturation.

Authors:  Pierre Barraud; Alexandre Gato; Matthias Heiss; Marjorie Catala; Stefanie Kellner; Carine Tisné
Journal:  Nat Commun       Date:  2019-07-29       Impact factor: 14.919

5.  Inhibitory mechanism of reveromycin A at the tRNA binding site of a class I synthetase.

Authors:  Bingyi Chen; Siting Luo; Songxuan Zhang; Yingchen Ju; Qiong Gu; Jun Xu; Xiang-Lei Yang; Huihao Zhou
Journal:  Nat Commun       Date:  2021-03-12       Impact factor: 14.919

6.  Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.

Authors:  Egor A Syroegin; Elena V Aleksandrova; Yury S Polikanov
Journal:  Nucleic Acids Res       Date:  2022-07-22       Impact factor: 19.160

7.  Structural characterization of recombinant IAV polymerase reveals a stable complex between viral PA-PB1 heterodimer and host RanBP5.

Authors:  Christopher Swale; Alexandre Monod; Laura Tengo; Alice Labaronne; Frédéric Garzoni; Jean-Marie Bourhis; Stephen Cusack; Guy Schoehn; Imre Berger; Rob W H Ruigrok; Thibaut Crépin
Journal:  Sci Rep       Date:  2016-04-20       Impact factor: 4.379

  7 in total

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