Literature DB >> 26224105

Genetic variation for leaf morphology, leaf structure and leaf carbon isotope discrimination in European populations of black poplar (Populus nigra L.).

Justine Guet1, Francesco Fabbrini2, Régis Fichot3, Maurizio Sabatti2, Catherine Bastien4, Franck Brignolas5.   

Abstract

To buffer against the high spatial and temporal heterogeneity of the riparian habitat, riparian tree species, such as black poplar (Populus nigra L.), may display a high level of genetic variation and phenotypic plasticity for functional traits. Using a multisite common garden experiment, we estimated the relative contribution of genetic and environmental effects on the phenotypic variation expressed for individual leaf area, leaf shape, leaf structure and leaf carbon isotope discrimination (Δ(13)C) in natural populations of black poplar. Twenty-four to 62 genotypes were sampled in nine metapopulations covering a latitudinal range from 48 °N to 42 °N in France and in Italy and grown in two common gardens at Orléans (ORL) and at Savigliano (SAV). In the two common gardens, substantial genetic variation was expressed for leaf traits within all metapopulations, but its expression was modulated by the environment, as attested by the genotype × environment (G × E) interaction variance being comparable to or even greater than genetic effects. For LA, G × E interactions were explained by both changes in genotype ranking between common gardens and increased variation in SAV, while these interactions were mainly attributed to changes in genotype ranking for Δ(13)C. The nine P. nigra metapopulations were highly differentiated for LA, as attested by the high coefficient of genetic differentiation (QST = 0.50 at ORL and 0.51 at SAV), and the pattern of metapopulation differentiation was highly conserved between the two common gardens. In contrast, they were moderately differentiated for Δ(13)C (QST = 0.24 at ORL and 0.25 at SAV) and the metapopulation clustering changed significantly between common gardens. Our results evidenced that the nine P. nigra metapopulations present substantial genetic variation and phenotypic plasticity for leaf traits, which both represent potentially significant determinants of populations' capacities to respond, on a short-term basis and over generations, to environmental variations.
© The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  bulk leaf carbon isotope discrimination; common gardens; leaf traits; natural populations; phenotypic plasticity; population differentiation

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Substances:

Year:  2015        PMID: 26224105     DOI: 10.1093/treephys/tpv056

Source DB:  PubMed          Journal:  Tree Physiol        ISSN: 0829-318X            Impact factor:   4.196


  9 in total

1.  Genetic differentiation in functional traits among European sessile oak populations.

Authors:  José M Torres-Ruiz; Antoine Kremer; Madeline R Carins Murphy; Tim Brodribb; Laurent J Lamarque; Laura Truffaut; Fabrice Bonne; Alexis Ducousso; Sylvain Delzon
Journal:  Tree Physiol       Date:  2019-10-01       Impact factor: 4.196

2.  Variation, coordination, and trade-offs between needle structures and photosynthetic-related traits across five Picea species: consequences on plant growth.

Authors:  Junchen Wang; Fangqun Ouyang; Sanping An; Lifang Wang; Na Xu; Jianwei Ma; Junhui Wang; Hanguo Zhang; Lisheng Kong
Journal:  BMC Plant Biol       Date:  2022-05-17       Impact factor: 5.260

3.  Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years.

Authors:  Sofia Berlin; Henrik R Hallingbäck; Friderike Beyer; Nils-Erik Nordh; Martin Weih; Ann-Christin Rönnberg-Wästljung
Journal:  Ann Bot       Date:  2017-07-01       Impact factor: 4.357

4.  Gene expression predictions and networks in natural populations supports the omnigenic theory.

Authors:  Aurélien Chateigner; Marie-Claude Lesage-Descauses; Odile Rogier; Véronique Jorge; Jean-Charles Leplé; Véronique Brunaud; Christine Paysant-Le Roux; Ludivine Soubigou-Taconnat; Marie-Laure Martin-Magniette; Leopoldo Sanchez; Vincent Segura
Journal:  BMC Genomics       Date:  2020-06-22       Impact factor: 3.969

5.  Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra.

Authors:  Odile Rogier; Aurélien Chateigner; Souhila Amanzougarene; Marie-Claude Lesage-Descauses; Sandrine Balzergue; Véronique Brunaud; José Caius; Ludivine Soubigou-Taconnat; Véronique Jorge; Vincent Segura
Journal:  BMC Genomics       Date:  2018-12-12       Impact factor: 3.969

6.  Study on the differences of phyllosphere microorganisms between poplar hybrid offspring and their parents.

Authors:  Changjun Ding; Weixi Zhang; Yanbo Wang; Mi Ding; Xiaojiang Wang; Aiping Li; Dejun Liang; Xiaohua Su
Journal:  PeerJ       Date:  2022-03-15       Impact factor: 2.984

7.  eQTLs are key players in the integration of genomic and transcriptomic data for phenotype prediction.

Authors:  Leopoldo Sanchez; Vincent Segura; Abdou Rahmane Wade; Harold Duruflé
Journal:  BMC Genomics       Date:  2022-06-28       Impact factor: 4.547

8.  Phenomic Selection Is a Low-Cost and High-Throughput Method Based on Indirect Predictions: Proof of Concept on Wheat and Poplar.

Authors:  Renaud Rincent; Jean-Paul Charpentier; Patricia Faivre-Rampant; Etienne Paux; Jacques Le Gouis; Catherine Bastien; Vincent Segura
Journal:  G3 (Bethesda)       Date:  2018-12-10       Impact factor: 3.154

9.  Genetic diversity and population structure of black cottonwood (Populus deltoides) revealed using simple sequence repeat markers.

Authors:  Cun Chen; Yanguang Chu; Changjun Ding; Xiaohua Su; Qinjun Huang
Journal:  BMC Genet       Date:  2020-01-06       Impact factor: 2.797

  9 in total

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