Literature DB >> 26221708

Efficient Gaussian Process-Based Modelling and Prediction of Image Time Series.

Marco Lorenzi, Gabriel Ziegler, Daniel C Alexander, Sebastien Ourselin.   

Abstract

In this work we propose a novel Gaussian process-based spatio-temporal model of time series of images. By assuming separability of spatial and temporal processes we provide a very efficient and robust formulation for the marginal likelihood computation and the posterior prediction. The model adaptively accounts for local spatial correlations of the data, and the covariance structure is effectively parameterised by the Kronecker product of covariance matrices of very small size, each encoding only a single direction in space. We provide a simple and flexible framework for within- and between-subject modelling and prediction. In particular, we introduce the Hoffman-Ribak method for efficient inference on posterior processes and its uncertainty. The proposed framework is applied in the context of longitudinal modelling in Alzheimer's disease. We firstly demonstrate the advantage of our non-parametric method for modelling of within-subject structural changes. The results show that non-parametric methods demonstrably outperform conventional parametric methods. Then the framework is extended to optimize complex parametrized covariate kernels. Using Bayesian model comparison via marginal likelihood the framework enables to compare different hypotheses about individual change processes of images.

Entities:  

Mesh:

Year:  2015        PMID: 26221708      PMCID: PMC6742508          DOI: 10.1007/978-3-319-19992-4_49

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  5 in total

1.  Early Diagnosis of Alzheimer's Disease by Joint Feature Selection and Classification on Temporally Structured Support Vector Machine.

Authors:  Yingying Zhu; Xiaofeng Zhu; Minjeong Kim; Dinggang Shen; Guorong Wu
Journal:  Med Image Comput Comput Assist Interv       Date:  2016-10-02

2.  STGP: Spatio-temporal Gaussian process models for longitudinal neuroimaging data.

Authors:  Jung Won Hyun; Yimei Li; Chao Huang; Martin Styner; Weili Lin; Hongtu Zhu
Journal:  Neuroimage       Date:  2016-04-19       Impact factor: 6.556

Review 3.  [Machine learning in radiology : Terminology from individual timepoint to trajectory].

Authors:  Georg Langs; Ulrike Attenberger; Roxane Licandro; Johannes Hofmanninger; Matthias Perkonigg; Mario Zusag; Sebastian Röhrich; Daniel Sobotka; Helmut Prosch
Journal:  Radiologe       Date:  2020-01       Impact factor: 0.635

4.  Modeling longitudinal imaging biomarkers with parametric Bayesian multi-task learning.

Authors:  Leon M Aksman; Marzia A Scelsi; Andre F Marquand; Daniel C Alexander; Sebastien Ourselin; Andre Altmann
Journal:  Hum Brain Mapp       Date:  2019-06-05       Impact factor: 5.038

Review 5.  Spatial and spatio-temporal statistical analyses of retinal images: a review of methods and applications.

Authors:  Wenyue Zhu; Ruwanthi Kolamunnage-Dona; Yalin Zheng; Simon Harding; Gabriela Czanner
Journal:  BMJ Open Ophthalmol       Date:  2020-05-28
  5 in total

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