Literature DB >> 26221691

Shape Classification Using Wasserstein Distance for Brain Morphometry Analysis.

Zhengyu Su, Wei Zeng, Yalin Wang, Zhong-Lin Lu, Xianfeng Gu.   

Abstract

Brain morphometry study plays a fundamental role in medical imaging analysis and diagnosis. This work proposes a novel framework for brain cortical surface classification using Wasserstein distance, based on uniformization theory and Riemannian optimal mass transport theory. By Poincare uniformization theorem, all shapes can be conformally deformed to one of the three canonical spaces: the unit sphere, the Euclidean plane or the hyperbolic plane. The uniformization map will distort the surface area elements. The area-distortion factor gives a probability measure on the canonical uniformization space. All the probability measures on a Riemannian manifold form the Wasserstein space. Given any 2 probability measures, there is a unique optimal mass transport map between them, the transportation cost defines the Wasserstein distance between them. Wasserstein distance gives a Riemannian metric for the Wasserstein space. It intrinsically measures the dissimilarities between shapes and thus has the potential for shape classification. To the best of our knowledge, this is the first. work to introduce the optimal mass transport map to general Riemannian manifolds. The method is based on geodesic power Voronoi diagram. Comparing to the conventional methods, our approach solely depends on Riemannian metrics and is invariant under rigid motions and scalings, thus it intrinsically measures shape distance. Experimental results on classifying brain cortical surfaces with different intelligence quotients demonstrated the efficiency and efficacy of our method.

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Year:  2015        PMID: 26221691      PMCID: PMC4527322          DOI: 10.1007/978-3-319-19992-4_32

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  14 in total

1.  Elastic geodesic paths in shape space of parameterized surfaces.

Authors:  Sebastian Kurtek; Eric Klassen; John C Gore; Zhaohua Ding; Anuj Srivastava
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-09       Impact factor: 6.226

2.  Shape Analysis of Elastic Curves in Euclidean Spaces.

Authors:  Anuj Srivastava; Eric Klassen; Shantanu H Joshi; Ian H Jermyn
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-10-14       Impact factor: 6.226

3.  Fractal dimension in human cortical surface: multiple regression analysis with cortical thickness, sulcal depth, and folding area.

Authors:  Kiho Im; Jong-Min Lee; Uicheul Yoon; Yong-Wook Shin; Soon Beom Hong; In Young Kim; Jun Soo Kwon; Sun I Kim
Journal:  Hum Brain Mapp       Date:  2006-12       Impact factor: 5.038

4.  Positive correlations between corpus callosum thickness and intelligence.

Authors:  Eileen Luders; Katherine L Narr; Robert M Bilder; Paul M Thompson; Philip R Szeszko; Liberty Hamilton; Arthur W Toga
Journal:  Neuroimage       Date:  2007-07-12       Impact factor: 6.556

5.  Discrete surface Ricci flow.

Authors:  Miao Jin; Junho Kim; Feng Luo; Xianfeng Gu
Journal:  IEEE Trans Vis Comput Graph       Date:  2008 Sep-Oct       Impact factor: 4.579

6.  Measuring and comparing brain cortical surface area and other areal quantities.

Authors:  Anderson M Winkler; Mert R Sabuncu; B T Thomas Yeo; Bruce Fischl; Douglas N Greve; Peter Kochunov; Thomas E Nichols; John Blangero; David C Glahn
Journal:  Neuroimage       Date:  2012-03-15       Impact factor: 6.556

7.  Prediction for human intelligence using morphometric characteristics of cortical surface: partial least square analysis.

Authors:  J-J Yang; U Yoon; H J Yun; K Im; Y Y Choi; K H Lee; H Park; M G Hough; J-M Lee
Journal:  Neuroscience       Date:  2013-04-30       Impact factor: 3.590

8.  Cortical surface thickness as a classifier: boosting for autism classification.

Authors:  Vikas Singh; Lopamudra Mukherjee; Moo K Chung
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

9.  A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Authors:  Wei Wang; Dejan Slepčev; Saurav Basu; John A Ozolek; Gustavo K Rohde
Journal:  Int J Comput Vis       Date:  2013-01-01       Impact factor: 7.410

10.  Mapping the relationship between cortical convolution and intelligence: effects of gender.

Authors:  Eileen Luders; Katherine L Narr; Robert M Bilder; Philip R Szeszko; Mala N Gurbani; Liberty Hamilton; Arthur W Toga; Christian Gaser
Journal:  Cereb Cortex       Date:  2007-12-17       Impact factor: 5.357

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  8 in total

1.  Surface Foliation Based Brain Morphometry Analysis.

Authors:  Chengfeng Wen; Na Lei; Ming Ma; Xin Qi; Wen Zhang; Yalin Wang; Xianfeng Gu
Journal:  Multimodal Brain Image Anal Math Found Comput Anat (2019)       Date:  2019-10-10

2.  Conformal invariants for multiply connected surfaces: Application to landmark curve-based brain morphometry analysis.

Authors:  Jie Shi; Wen Zhang; Miao Tang; Richard J Caselli; Yalin Wang
Journal:  Med Image Anal       Date:  2016-09-06       Impact factor: 8.545

3.  A Transportation Lp Distance for Signal Analysis.

Authors:  Matthew Thorpe; Serim Park; Soheil Kolouri; Gustavo K Rohde; Dejan Slepčev
Journal:  J Math Imaging Vis       Date:  2017-03-23       Impact factor: 1.627

4.  Hyperbolic Wasserstein Distance for Shape Indexing.

Authors:  Jie Shi; Yalin Wang
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2019-02-08       Impact factor: 6.226

5.  Computing Univariate Neurodegenerative Biomarkers with Volumetric Optimal Transportation: A Pilot Study.

Authors:  Yanshuai Tu; Liang Mi; Wen Zhang; Haomeng Zhang; Junwei Zhang; Yonghui Fan; Dhruman Goradia; Kewei Chen; Richard J Caselli; Eric M Reiman; Xianfeng Gu; Yalin Wang
Journal:  Neuroinformatics       Date:  2020-10

6.  An Optimal Transportation based Univariate Neuroimaging Index.

Authors:  Liang Mi; Wen Zhang; Junwei Zhang; Yonghui Fan; Dhruman Goradia; Kewei Chen; Eric M Reiman; Xianfeng Gu; Yalin Wang
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2017

7.  Shape Analysis with Hyperbolic Wasserstein Distance.

Authors:  Jie Shi; Wen Zhang; Yalin Wang
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2016-12-12

8.  Cortical Surface Shape Analysis Based on Alexandrov Polyhedra.

Authors:  Min Zhang; Yang Guo; Na Lei; Zhou Zhao; Jianfeng Wu; Xiaoyin Xu; Yalin Wang; Xianfeng Gu
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2021-10
  8 in total

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