Literature DB >> 26218226

The complete chloroplast genome sequence of Ledebouriella seseloides (Hoffm.) H. Wolff.

Hyun Oh Lee1,2, Kyunghee Kim1,2, Sang-Choon Lee1, Junki Lee1, Jonghoon Lee1, Soonok Kim3, Tae-Jin Yang1.   

Abstract

Ledebouriella seseloides (Hoffm.) H.Wolff is a traditional medicinal herb belonging to Apiaceae family, whose dried roots and rhizomes have been used as traditional medicine in East Asian countries. The complete chloroplast genome of L. seseloides was obtained by de novo assembly using the small amount of whole genome sequencing data. The chloroplast genome of L. seseloides was 147 880 bp in length, which consisted of large single copy region (93 222 bp), small single copy region (17 324 bp), and a pair of inverted repeat regions (18 667 bp). The overall GC contents of the chloroplast genome were 37.5%. A total of 113 genes were annotated, which included 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that L. seseloides is most closely related to Petroselinum crispum (parsley), an herb widely used in cooking.

Entities:  

Keywords:  Chloroplast; Ledebouriella seseloides; genome sequence; medicinal plant

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Year:  2015        PMID: 26218226     DOI: 10.3109/19401736.2015.1066366

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  2 in total

1.  The Chloroplast Genome of Wild Saposhnikovia divaricata: Genomic Features, Comparative Analysis, and Phylogenetic Relationships.

Authors:  Shanyong Yi; Haibo Lu; Wei Wang; Guanglin Wang; Tao Xu; Mingzhi Li; Fangli Gu; Cunwu Chen; Bangxing Han; Dong Liu
Journal:  Genes (Basel)       Date:  2022-05-23       Impact factor: 4.141

2.  Dynamic Chloroplast Genome Rearrangement and DNA Barcoding for Three Apiaceae Species Known as the Medicinal Herb "Bang-Poong".

Authors:  Hyun Oh Lee; Ho Jun Joh; Kyunghee Kim; Sang-Choon Lee; Nam-Hoon Kim; Jee Young Park; Hyun-Seung Park; Mi-So Park; Soonok Kim; Myounghai Kwak; Kyu-Yeob Kim; Woo Kyu Lee; Tae-Jin Yang
Journal:  Int J Mol Sci       Date:  2019-05-04       Impact factor: 5.923

  2 in total

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