Literature DB >> 26217954

Correction: PCR Primers for Metazoan Nuclear 18S and 28S Ribosomal DNA Sequences.

Ryuji J Machida, Nancy Knowlton.   

Abstract

Year:  2015        PMID: 26217954      PMCID: PMC4517788          DOI: 10.1371/journal.pone.0134314

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


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The header “Forward primers (3' to 5')” should read “Forward primers (5' to 3'),” and the header “Reverse complement primers (3' to 5’)” should read “Reverse complement primers (5' to 3’).” The authors have provided a corrected version of Table 1 here.
Table 1

List of the 18S and 28S ribosomal DNA primers designed in this study.

Primers 28S #6, 28S #8, and 28S #10 were modified from primers 22, 24, 26 [21], respectively. Primers ultimately selected for best overall efficacy are highlighted in bold.

18S ribosomal DNA
Forward primers (5' to 3')Reverse complement primers (5' to 3')Degeneracy
#1: CTGGTGCCAGCAGCCGCGGYAA 2
#2: AACTTAAAGRAATTGACGGA #2_RC: TCCGTCAATTYCTTTAAGTT 2
#3: GYGGTGCATGGCCGTTSKTRGTT#3_RC: AACYAMSAACGGCCATGCACCRC16
#4: ATAACAGGTCWGTRATGCCCTYMG#4_RC: CKRAGGGCATYACWGACCTGTTAT16
#5_RC: GTGTGYACAAAGGBCAGGGAC6
28S ribosomal DNA
Forward primers (5' to 3')Reverse complement primers (5' to 3')Degeneracy
#1: CCGTCTTGAAACACGGDCYRAG6
#2: AGGGGCGAAAGACYAATCGAA#2_RC: TTCGATTRGTCTTTCGCCCCT2
#3: TTTTGGTAAGCAGAACTGGYG#3_RC: CRCCAGTTCTGCTTACCAAAA2
#4: GATCTYRGTGGYAGTAGCRAVT#4_RC: ABTYGCTACTRCCACYRAGATC48
#5: GGGAATCYRACTGTHTAATTAAA#5_RC: TTTAATTADACAGTYRGATTCCC12
#6: TGATTTCTGCCCAGTGCTYWGAAWGT#6_RC: ACWTTCWRAGCACTGGGCAGAAATCA8
#7: AACGGCGGRRGTAACTATGACTYT#7_RC: ARAGTCATAGTTACYYCCGCCGTT8
#8: GGGAAAGAAGACCCTGTTGAG #8_RC: CTCAACAGGGTCTTCTTTCCC1
#9: AAGACCCTGTTGAGYTTGACTCT#9_RC: AGAGTCAARCTCAACAGGGTCTT2
#10: GGGAGTTTGRCTGGGGCGG#10_RC: CCGCCCCAGYCAAACTCCC2
#11_RC: GCTTGGCBGCCACAAGCCAGTTA 3

List of the 18S and 28S ribosomal DNA primers designed in this study.

Primers 28S #6, 28S #8, and 28S #10 were modified from primers 22, 24, 26 [21], respectively. Primers ultimately selected for best overall efficacy are highlighted in bold.
  1 in total

1.  PCR primers for metazoan nuclear 18S and 28S ribosomal DNA sequences.

Authors:  Ryuji J Machida; Nancy Knowlton
Journal:  PLoS One       Date:  2012-09-25       Impact factor: 3.240

  1 in total

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