Literature DB >> 26209634

Small GTPase Rab2B and Its Specific Binding Protein Golgi-associated Rab2B Interactor-like 4 (GARI-L4) Regulate Golgi Morphology.

Megumi Aizawa1, Mitsunori Fukuda2.   

Abstract

Rab small GTPases are crucial regulators of the membrane traffic that maintains organelle identity and morphology. Several Rab isoforms are present in the Golgi, and it has been suggested that they regulate the compacted morphology of the Golgi in mammalian cells. However, the functional relationships among the Golgi-resident Rabs, e.g. whether they are functionally redundant or different, are poorly understood. In this study, we used specific siRNAs to perform genome-wide screening for human Rabs that are involved in Golgi morphology in HeLa-S3 cells. The results showed that knockdown of any one of the six Rab isoforms (Rab1A/1B/2A/2B/6B/8A) induced fragmentation of the Golgi in HeLa-S3 cells and that its phenotype was rescued by re-expression of their respective siRNA-resistant construct. We then performed systematic knockdown-rescue experiments in relation to each of the six Rabs. Interestingly, with the exception of the Rab8A knockdown, the Golgi fragmentation phenotype induced by knockdown of a single Rab isoform, e.g. Rab2B, was efficiently rescued by re-expression of its siRNA-resistant Rab alone, not by any of the other five Rabs, e.g. Rab2A, which is highly homologous to Rab2B, indicating that these Rab isoforms non-redundantly regulate Golgi morphology possibly through interaction with isoform-specific effector molecules. In addition, we identified Golgi-associated Rab2B interactor-like 4 (GARI-L4) as a novel Golgi-resident Rab2B-specific binding protein whose knockdown also induced fragmentation of the Golgi. Our findings suggest that the compacted Golgi morphology of mammalian cells is finely tuned by multiple sets of Rab (or Rab-effector complexes) that for the most part function independently.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  G protein; Golgi; Rab; membrane trafficking; organelle; small GTPase; small interfering RNA (siRNA); yeast two-hybrid

Mesh:

Substances:

Year:  2015        PMID: 26209634      PMCID: PMC4571976          DOI: 10.1074/jbc.M115.669242

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  51 in total

1.  Rab8b and its interacting partner TRIP8b are involved in regulated secretion in AtT20 cells.

Authors:  S Chen; M C Liang; J N Chia; J K Ngsee; A E Ting
Journal:  J Biol Chem       Date:  2001-01-24       Impact factor: 5.157

2.  A complete genetic analysis of neuronal Rab3 function.

Authors:  Oliver M Schlüter; Frank Schmitz; Reinhard Jahn; Christian Rosenmund; Thomas C Südhof
Journal:  J Neurosci       Date:  2004-07-21       Impact factor: 6.167

3.  The Golgi matrix protein GM130: a specific interacting partner of the small GTPase rab1b.

Authors:  T Weide; M Bayer; M Köster; J P Siebrasse; R Peters; A Barnekow
Journal:  EMBO Rep       Date:  2001-04       Impact factor: 8.807

4.  Rab1 interaction with a GM130 effector complex regulates COPII vesicle cis--Golgi tethering.

Authors:  B D Moyer; B B Allan; W E Balch
Journal:  Traffic       Date:  2001-04       Impact factor: 6.215

5.  Distinct Rab binding specificity of Rim1, Rim2, rabphilin, and Noc2. Identification of a critical determinant of Rab3A/Rab27A recognition by Rim2.

Authors:  Mitsunori Fukuda
Journal:  J Biol Chem       Date:  2003-02-10       Impact factor: 5.157

6.  Rab11b resides in a vesicular compartment distinct from Rab11a in parietal cells and other epithelial cells.

Authors:  Lynne A Lapierre; Matthew C Dorn; C Faith Zimmerman; Jennifer Navarre; Jason O Burnette; James R Goldenring
Journal:  Exp Cell Res       Date:  2003-11-01       Impact factor: 3.905

Review 7.  Rab GTPase regulation of membrane identity.

Authors:  Suzanne R Pfeffer
Journal:  Curr Opin Cell Biol       Date:  2013-04-29       Impact factor: 8.382

8.  The small GTPase Rab27B regulates amylase release from rat parotid acinar cells.

Authors:  Akane Imai; Sumio Yoshie; Tomoko Nashida; Hiromi Shimomura; Mitsunori Fukuda
Journal:  J Cell Sci       Date:  2004-03-23       Impact factor: 5.285

9.  A GRASP55-rab2 effector complex linking Golgi structure to membrane traffic.

Authors:  B Short; C Preisinger; R Körner; R Kopajtich; O Byron; F A Barr
Journal:  J Cell Biol       Date:  2001-12-10       Impact factor: 10.539

Review 10.  Review series: Rab GTPases and membrane identity: causal or inconsequential?

Authors:  Francis A Barr
Journal:  J Cell Biol       Date:  2013-07-22       Impact factor: 10.539

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  28 in total

1.  A comprehensive analysis of Rab GTPases reveals a role for Rab34 in serum starvation-induced primary ciliogenesis.

Authors:  Mai E Oguchi; Koki Okuyama; Yuta Homma; Mitsunori Fukuda
Journal:  J Biol Chem       Date:  2020-07-15       Impact factor: 5.157

2.  Small Interfering RNA Screening for the Small GTPase Rab Proteins Identifies Rab5B as a Major Regulator of Hepatitis B Virus Production.

Authors:  Jun Inoue; Masashi Ninomiya; Teruyuki Umetsu; Takuya Nakamura; Takayuki Kogure; Eiji Kakazu; Tomoaki Iwata; Satoshi Takai; Akitoshi Sano; Mitsunori Fukuda; Koichi Watashi; Masanori Isogawa; Yasuhito Tanaka; Tooru Shimosegawa; Mark A McNiven; Atsushi Masamune
Journal:  J Virol       Date:  2019-07-17       Impact factor: 5.103

3.  Innate immunity kinase TAK1 phosphorylates Rab1 on a hotspot for posttranslational modifications by host and pathogen.

Authors:  Rebecca S Levin; Nicholas T Hertz; Alma L Burlingame; Kevan M Shokat; Shaeri Mukherjee
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-01       Impact factor: 11.205

4.  Fragmentation of the Golgi complex of dopaminergic neurons in human substantia nigra: New cytopathological findings in Parkinson's disease.

Authors:  Mónica Tomás; Emma Martínez-Alonso; Narcisa Martínez-Martínez; Mireia Cara-Esteban; José A Martínez-Menárguez
Journal:  Histol Histopathol       Date:  2020-10-20       Impact factor: 2.303

Review 5.  Rab proteins as major determinants of the Golgi complex structure.

Authors:  Bruno Goud; Shijie Liu; Brian Storrie
Journal:  Small GTPases       Date:  2018-01-29

Review 6.  Consequences of Rab GTPase dysfunction in genetic or acquired human diseases.

Authors:  Marcellus J Banworth; Guangpu Li
Journal:  Small GTPases       Date:  2017-12-28

7.  The RAB2B-GARIL5 Complex Promotes Cytosolic DNA-Induced Innate Immune Responses.

Authors:  Michihiro Takahama; Mitsunori Fukuda; Norihiko Ohbayashi; Tatsuya Kozaki; Takuma Misawa; Toru Okamoto; Yoshiharu Matsuura; Shizuo Akira; Tatsuya Saitoh
Journal:  Cell Rep       Date:  2017-09-19       Impact factor: 9.423

8.  The BLOC-3 subunit HPS4 is required for activation of Rab32/38 GTPases in melanogenesis, but its Rab9 activity is dispensable for melanogenesis.

Authors:  Yuta Ohishi; Riko Kinoshita; Soujiro Marubashi; Morié Ishida; Mitsunori Fukuda
Journal:  J Biol Chem       Date:  2019-03-05       Impact factor: 5.157

9.  EhRab21 associates with the Golgi apparatus in Entamoeba histolytica.

Authors:  Luis A Constantino-Jonapa; Verónica Ivonne Hernández-Ramírez; Carlos Osorio-Trujillo; Patricia Talamás-Rohana
Journal:  Parasitol Res       Date:  2020-03-26       Impact factor: 2.289

10.  RAB2A controls MT1-MMP endocytic and E-cadherin polarized Golgi trafficking to promote invasive breast cancer programs.

Authors:  Hiroaki Kajiho; Yuko Kajiho; Emanuela Frittoli; Stefano Confalonieri; Giovanni Bertalot; Giuseppe Viale; Pier Paolo Di Fiore; Amanda Oldani; Massimiliano Garre; Galina V Beznoussenko; Andrea Palamidessi; Manuela Vecchi; Philippe Chavrier; Frank Perez; Giorgio Scita
Journal:  EMBO Rep       Date:  2016-06-02       Impact factor: 8.807

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