Literature DB >> 26208309

Robustness-Driven Feature Selection in Classification of Fibrotic Interstitial Lung Disease Patterns in Computed Tomography Using 3D Texture Features.

Daniel Y Chong, Hyun J Kim, Pechin Lo, Stefano Young, Michael F McNitt-Gray, Fereidoun Abtin, Jonathan G Goldin, Matthew S Brown.   

Abstract

Lack of classifier robustness is a barrier to widespread adoption of computer-aided diagnosis systems for computed tomography (CT). We propose a novel Robustness-Driven Feature Selection (RDFS) algorithm that preferentially selects features robust to variations in CT technical factors. We evaluated RDFS in CT classification of fibrotic interstitial lung disease using 3D texture features. CTs were collected for 99 adult subjects separated into three datasets: training, multi-reconstruction, testing. Two thoracic radiologists provided cubic volumes of interest corresponding to six classes: pulmonary fibrosis, ground-glass opacity, honeycombing, normal lung parenchyma, airway, vessel. The multi-reconstruction dataset consisted of CT raw sinogram data reconstructed by systematically varying slice thickness, reconstruction kernel, and tube current (using a synthetic reduced-tube-current algorithm). Two support vector machine classifiers were created, one using RDFS ("with-RDFS") and one not ("without-RDFS"). Classifier robustness was compared on the multi-reconstruction dataset, using Cohen's kappa to assess classification agreement against a reference reconstruction. Classifier performance was compared on the testing dataset using the extended g-mean (EGM) measure. With-RDFS exhibited superior robustness (kappa 0.899-0.989) compared to without-RDFS (kappa 0.827-0.968). Both classifiers demonstrated similar performance on the testing dataset (EGM 0.778 for with-RDFS; 0.785 for without-RDFS), indicating that RDFS does not compromise classifier performance when discarding nonrobust features. RDFS is highly effective at improving classifier robustness against slice thickness, reconstruction kernel, and tube current without sacrificing performance, a result that has implications for multicenter clinical trials that rely on accurate and reproducible quantitative analysis of CT images collected under varied conditions across multiple sites, scanners, and timepoints.

Entities:  

Mesh:

Year:  2015        PMID: 26208309     DOI: 10.1109/TMI.2015.2459064

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  8 in total

1.  Predicting Locations of High-Risk Plaques in Coronary Arteries in Patients Receiving Statin Therapy.

Authors:  Ling Zhang; Andreas Wahle; Zhi Chen; John J Lopez; Tomas Kovarnik; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2017-07-11       Impact factor: 10.048

Review 2.  Pulmonary quantitative CT imaging in focal and diffuse disease: current research and clinical applications.

Authors:  Mario Silva; Gianluca Milanese; Valeria Seletti; Alarico Ariani; Nicola Sverzellati
Journal:  Br J Radiol       Date:  2018-01-12       Impact factor: 3.039

Review 3.  Origins of and lessons from quantitative functional X-ray computed tomography of the lung.

Authors:  Eric A Hoffman
Journal:  Br J Radiol       Date:  2022-03-01       Impact factor: 3.629

4.  End-to-end domain knowledge-assisted automatic diagnosis of idiopathic pulmonary fibrosis (IPF) using computed tomography (CT).

Authors:  Wenxi Yu; Hua Zhou; Jonathan G Goldin; Weng Kee Wong; Grace Hyun J Kim
Journal:  Med Phys       Date:  2021-03-19       Impact factor: 4.071

5.  Color-coded visualization of magnetic resonance imaging multiparametric maps.

Authors:  Jakob Nikolas Kather; Anja Weidner; Ulrike Attenberger; Yannick Bukschat; Cleo-Aron Weis; Meike Weis; Lothar R Schad; Frank Gerrit Zöllner
Journal:  Sci Rep       Date:  2017-01-23       Impact factor: 4.379

Review 6.  Experimental and quantitative imaging techniques in interstitial lung disease.

Authors:  Nicholas D Weatherley; James A Eaden; Neil J Stewart; Brian J Bartholmai; Andrew J Swift; Stephen Mark Bianchi; Jim M Wild
Journal:  Thorax       Date:  2019-03-18       Impact factor: 9.139

7.  Quantitative assessment of interstitial lung disease in Sjögren's syndrome.

Authors:  Pablo Guisado-Vasco; Mario Silva; Miguel Angel Duarte-Millán; Gianluca Sambataro; Chiara Bertolazzi; Mauro Pavone; Isabel Martín-Garrido; Oriol Martín-Segarra; José Manuel Luque-Pinilla; Daniele Santilli; Domenico Sambataro; Sebastiano E Torrisi; Ada Vancheri; Marwin Gutiérrez; Mayra Mejia; Stefano Palmucci; Flavio Mozzani; Jorge Rojas-Serrano; Carlo Vanchieri; Nicola Sverzellati; Alarico Ariani
Journal:  PLoS One       Date:  2019-11-08       Impact factor: 3.240

8.  COVID-19 image classification using deep features and fractional-order marine predators algorithm.

Authors:  Ahmed T Sahlol; Dalia Yousri; Ahmed A Ewees; Mohammed A A Al-Qaness; Robertas Damasevicius; Mohamed Abd Elaziz
Journal:  Sci Rep       Date:  2020-09-21       Impact factor: 4.379

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.