Literature DB >> 26208211

Whole-exome sequencing as a diagnostic tool for distal renal tubular acidosis.

Paula Cristina Barros Pereira1, Flávia Medeiros Melo1, Luiz Armando Cunha De Marco2, Eduardo Araújo Oliveira3, Débora Marques Miranda3, Ana Cristina Simões e Silva4.   

Abstract

OBJECTIVE: Distal renal tubular acidosis (dRTA) is characterized by metabolic acidosis due to impaired renal acid excretion. The aim of this study was to demonstrate the genetic diagnosis of four children with dRTA through use of whole-exome sequencing.
METHODS: Two unrelated families were selected; a total of four children with dRTA and their parents, in order to perform whole-exome sequencing. Hearing was preserved in both children from the first family, but not in the second, wherein a twin pair had severe deafness. Whole-exome sequencing was performed in two pooled samples and findings were confirmed with Sanger sequencing method.
RESULTS: Two mutations were identified in the ATP6V0A4 and ATP6V1B1 genes. In the first family, a novel mutation in the exon 13 of the ATP6V0A4 gene with a single nucleotide change GAC → TAC (c.1232G>T) was found, which caused a substitution of aspartic acid to tyrosine in position 411. In the second family, a homozygous recurrent mutation with one base-pair insertion (c.1149_1155insC) in exon 12 of the ATP6V1B1 gene was detected.
CONCLUSION: These results confirm the value of whole-exome sequencing for the study of rare and complex genetic nephropathies, allowing the identification of novel and recurrent mutations. Furthermore, for the first time the application of this molecular method in renal tubular diseases has been clearly demonstrated.
Copyright © 2015 Sociedade Brasileira de Pediatria. Published by Elsevier Editora Ltda. All rights reserved.

Entities:  

Keywords:  ATP6V0A4; ATP6V1B1; Acidose tubular renal distal; Children; Crianças; Distal renal tubular acidosis; Genetics; Genética; Sequenciamento total do exoma; Whole-exome sequencing

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Year:  2015        PMID: 26208211     DOI: 10.1016/j.jped.2015.02.002

Source DB:  PubMed          Journal:  J Pediatr (Rio J)        ISSN: 0021-7557            Impact factor:   2.197


  4 in total

Review 1.  Distal renal tubular acidosis: genetic causes and management.

Authors:  Sílvia Bouissou Morais Soares; Luiz Alberto Wanderley de Menezes Silva; Flávia Cristina de Carvalho Mrad; Ana Cristina Simões E Silva
Journal:  World J Pediatr       Date:  2019-05-11       Impact factor: 2.764

2.  A novel heterozygous mutation in the ATP6V0A4 gene encoding the V-ATPase a4 subunit in an adult patient with incomplete distal renal tubular acidosis.

Authors:  Eri Imai; Shuzo Kaneko; Takayasu Mori; Tomokazu Okado; Shinichi Uchida; Yusuke Tsukamoto
Journal:  Clin Kidney J       Date:  2016-03-24

3.  Mutations in ATP6V1B1 and ATP6V0A4 genes cause recessive distal renal tubular acidosis in Mexican families.

Authors:  Laura I Escobar; Christopher Simian; Cyrielle Treard; Donia Hayek; Carolina Salvador; Norma Guerra; Mario Matos; Mara Medeiros; Sandra Enciso; María Dolores Camargo; Rosa Vargas-Poussou
Journal:  Mol Genet Genomic Med       Date:  2016-02-14       Impact factor: 2.183

4.  Distal Renal Tubular Acidosis in an Iranian Patient with Hereditary Spherocytosis

Authors:  Zahra Shahab-Movahed; Ahmad Majd; Elham Siasi Torbati; Sirous Zeinali
Journal:  Iran Biomed J       Date:  2021-09-01
  4 in total

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