Literature DB >> 26204808

Marine metagenomics as a source for bioprospecting.

Rimantas Kodzius1, Takashi Gojobori2.   

Abstract

This review summarizes usage of genome-editing technologies for metagenomic studies; these studies are used to retrieve and modify valuable microorganisms for production, particularly in marine metagenomics. Organisms may be cultivable or uncultivable. Metagenomics is providing especially valuable information for uncultivable samples. The novel genes, pathways and genomes can be deducted. Therefore, metagenomics, particularly genome engineering and system biology, allows for the enhancement of biological and chemical producers and the creation of novel bioresources. With natural resources rapidly depleting, genomics may be an effective way to efficiently produce quantities of known and novel foods, livestock feed, fuels, pharmaceuticals and fine or bulk chemicals.
Copyright © 2015. Published by Elsevier B.V.

Keywords:  Bioprospecting; Genetic engineering; Metabolic engineering; Microorganism; Producer; Synthetic biology

Mesh:

Year:  2015        PMID: 26204808     DOI: 10.1016/j.margen.2015.07.001

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  11 in total

Review 1.  Anticancer Activities of Marine-Derived Phenolic Compounds and Their Derivatives.

Authors:  Dario Matulja; Filip Vranješević; Maria Kolympadi Markovic; Sandra Kraljević Pavelić; Dean Marković
Journal:  Molecules       Date:  2022-02-21       Impact factor: 4.411

2.  Modulation of Medium-Chain Fatty Acid Synthesis in Synechococcus sp. PCC 7002 by Replacing FabH with a Chaetoceros Ketoacyl-ACP Synthase.

Authors:  Huiya Gu; Robert E Jinkerson; Fiona K Davies; Lyle A Sisson; Philip E Schneider; Matthew C Posewitz
Journal:  Front Plant Sci       Date:  2016-05-26       Impact factor: 5.753

Review 3.  Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity.

Authors:  Jens Nielsen; John Archer; Magbubah Essack; Vladimir B Bajic; Takashi Gojobori; Ivan Mijakovic
Journal:  Appl Microbiol Biotechnol       Date:  2017-05-20       Impact factor: 4.813

Review 4.  Marine-Derived Biocatalysts: Importance, Accessing, and Application in Aromatic Pollutant Bioremediation.

Authors:  Efstratios Nikolaivits; Maria Dimarogona; Nikolas Fokialakis; Evangelos Topakas
Journal:  Front Microbiol       Date:  2017-02-20       Impact factor: 5.640

Review 5.  Cell-Free Approaches in Synthetic Biology Utilizing Microfluidics.

Authors:  Samar Damiati; Rami Mhanna; Rimantas Kodzius; Eva-Kathrin Ehmoser
Journal:  Genes (Basel)       Date:  2018-03-06       Impact factor: 4.096

6.  A New Bioactive Compound From the Marine Sponge-Derived Streptomyces sp. SBT348 Inhibits Staphylococcal Growth and Biofilm Formation.

Authors:  Srikkanth Balasubramanian; Joseph Skaf; Ulrike Holzgrabe; Richa Bharti; Konrad U Förstner; Wilma Ziebuhr; Ute H Humeida; Usama R Abdelmohsen; Tobias A Oelschlaeger
Journal:  Front Microbiol       Date:  2018-07-11       Impact factor: 5.640

Review 7.  Fungal biosurfactants, from nature to biotechnological product: bioprospection, production and potential applications.

Authors:  André Felipe da Silva; Ibrahim M Banat; Admir José Giachini; Diogo Robl
Journal:  Bioprocess Biosyst Eng       Date:  2021-06-16       Impact factor: 3.210

Review 8.  Omics for Bioprospecting and Drug Discovery from Bacteria and Microalgae.

Authors:  Reuben Maghembe; Donath Damian; Abdalah Makaranga; Stephen Samwel Nyandoro; Sylvester Leonard Lyantagaye; Souvik Kusari; Rajni Hatti-Kaul
Journal:  Antibiotics (Basel)       Date:  2020-05-04

Review 9.  Secondary Metabolites from Gorgonian Corals of the Genus Eunicella: Structural Characterizations, Biological Activities, and Synthetic Approaches.

Authors:  Dario Matulja; Maria Kolympadi Markovic; Gabriela Ambrožić; Sylvain Laclef; Sandra Kraljević Pavelić; Dean Marković
Journal:  Molecules       Date:  2019-12-28       Impact factor: 4.411

10.  Integration of Droplet Microfluidic Tools for Single-Cell Functional Metagenomics: An Engineering Head Start.

Authors:  David Conchouso; Amani Al-Ma'abadi; Hayedeh Behzad; Mohammed Alarawi; Masahito Hosokawa; Yohei Nishikawa; Haruko Takeyama; Katsuhiko Mineta; Takashi Gojobori
Journal:  Genomics Proteomics Bioinformatics       Date:  2021-12-21       Impact factor: 7.691

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