Literature DB >> 26196832

Antipolar and Anticlinic Mesophase Order in Chromatin Induced by Nucleosome Polarity and Chirality Correlations.

R Garcés1, R Podgornik2,3, V Lorman1.   

Abstract

Contrary to the usual "rigid supermolecular assembly" paradigm of chromatin structure, we propose to analyze its eventual ordered state in terms of symmetry properties of individual nucleosomes that give rise to mesophase order parameters, like in many other soft-matter systems. Basing our approach on the Landau-de Gennes phenomenology, we describe the mesoscale order in chromatin by antipolar and anticlinic correlations of chiral individual nucleosomes. This approach leads to a unifying physical picture of a whole series of soft locally ordered states with different apparent structures, including the recently observed heteromorphic chromatin, stemming from the antipolar arrangement of nucleosomes complemented by their chiral twisting. Properties of these states under an external force field can reconcile apparently contradictory results of single-molecule experiments.

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Year:  2015        PMID: 26196832     DOI: 10.1103/PhysRevLett.114.238102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  3 in total

1.  Sticking and stacking: Persistent ordering of fragmented DNA analogs.

Authors:  Rudolf Podgornik
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-09       Impact factor: 11.205

2.  The Influence of Ionic Environment and Histone Tails on Columnar Order of Nucleosome Core Particles.

Authors:  Nikolay V Berezhnoy; Ying Liu; Abdollah Allahverdi; Renliang Yang; Chun-Jen Su; Chuan-Fa Liu; Nikolay Korolev; Lars Nordenskiöld
Journal:  Biophys J       Date:  2016-04-26       Impact factor: 4.033

3.  Physical principles of retroviral integration in the human genome.

Authors:  D Michieletto; M Lusic; D Marenduzzo; E Orlandini
Journal:  Nat Commun       Date:  2019-02-04       Impact factor: 14.919

  3 in total

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