Literature DB >> 26194112

Investigation of genes important in neurodevelopment disorders in adult human brain.

Gilles Maussion1,2, Alpha B Diallo1,2, Carolina O Gigek2,3, Elizabeth S Chen2,3, Liam Crapper1,2, Jean-Francois Théroux1,2, Gary G Chen1,2, Cristina Vasuta1,2, Carl Ernst4,5,6,7.   

Abstract

Several neurodevelopmental disorders (NDDs) are caused by mutations in genes expressed in fetal brain, but little is known about these same genes in adult human brain. Here, we test the hypothesis that genes associated with NDDs continue to have a role in adult human brain to explore the idea that NDD symptoms may be partially a result of their adult function rather than just their neurodevelopmental function. To demonstrate adult brain function, we performed expression analyses and ChIPseq in human neural stem cell(NSC) lines at different developmental stages and adult human brain, targeting two genes associated with NDDs, SATB2 and EHMT1, and the WNT signaling gene TCF7L2, which has not been associated with NDDs. Analysis of DNA interaction sites in neural stem cells reveals high (40-50 %) overlap between proliferating and differentiating cells for each gene in temporal space. Studies in adult brain demonstrate that consensus sites are similar to NSCs but occur at different genomic locations. We also performed expression analyses using BrainSpan data for NDD-associated genes SATB2, EHMT1, FMR1, MECP2, MBD5, CTNND2, RAI1, CHD8, GRIN2A, GRIN2B, TCF4, SCN2A, and DYRK1A and find high expression of these genes in adult brain, at least comparable to developing human brain, confirming that genes associated with NDDs likely have a role in adult tissue. Adult function of genes associated with NDDs might be important in clinical disease presentation and may be suitable targets for therapeutic intervention.

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Year:  2015        PMID: 26194112     DOI: 10.1007/s00439-015-1584-z

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  39 in total

1.  Isolation and characterization of SATB2, a novel AT-rich DNA binding protein expressed in development- and cell-specific manner in the rat brain.

Authors:  Marianna Szemes; Andrea Gyorgy; Cloud Paweletz; Albert Dobi; Denes V Agoston
Journal:  Neurochem Res       Date:  2006-04-04       Impact factor: 3.996

2.  Satb2 regulates callosal projection neuron identity in the developing cerebral cortex.

Authors:  Elizabeth A Alcamo; Laura Chirivella; Marcel Dautzenberg; Gergana Dobreva; Isabel Fariñas; Rudolf Grosschedl; Susan K McConnell
Journal:  Neuron       Date:  2008-02-07       Impact factor: 17.173

3.  Satb2 is a postmitotic determinant for upper-layer neuron specification in the neocortex.

Authors:  Olga Britanova; Camino de Juan Romero; Amanda Cheung; Kenneth Y Kwan; Manuela Schwark; Andrea Gyorgy; Tanja Vogel; Sergey Akopov; Miso Mitkovski; Denes Agoston; Nenad Sestan; Zoltán Molnár; Victor Tarabykin
Journal:  Neuron       Date:  2008-02-07       Impact factor: 17.173

4.  Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes.

Authors:  Struan F A Grant; Gudmar Thorleifsson; Inga Reynisdottir; Rafn Benediktsson; Andrei Manolescu; Jesus Sainz; Agnar Helgason; Hreinn Stefansson; Valur Emilsson; Anna Helgadottir; Unnur Styrkarsdottir; Kristinn P Magnusson; G Bragi Walters; Ebba Palsdottir; Thorbjorg Jonsdottir; Thorunn Gudmundsdottir; Arnaldur Gylfason; Jona Saemundsdottir; Robert L Wilensky; Muredach P Reilly; Daniel J Rader; Yu Bagger; Claus Christiansen; Vilmundur Gudnason; Gunnar Sigurdsson; Unnur Thorsteinsdottir; Jeffrey R Gulcher; Augustine Kong; Kari Stefansson
Journal:  Nat Genet       Date:  2006-01-15       Impact factor: 38.330

5.  TCF7L2 polymorphisms and progression to diabetes in the Diabetes Prevention Program.

Authors:  Jose C Florez; Kathleen A Jablonski; Nick Bayley; Toni I Pollin; Paul I W de Bakker; Alan R Shuldiner; William C Knowler; David M Nathan; David Altshuler
Journal:  N Engl J Med       Date:  2006-07-20       Impact factor: 91.245

6.  The brain-specific carnitine palmitoyltransferase-1c regulates energy homeostasis.

Authors:  Michael J Wolfgang; Takeshi Kurama; Yun Dai; Akira Suwa; Makoto Asaumi; Shun-Ichiro Matsumoto; Seung Hun Cha; Teruhiko Shimokawa; M Daniel Lane
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-01       Impact factor: 11.205

7.  Small deletions of SATB2 cause some of the clinical features of the 2q33.1 microdeletion syndrome.

Authors:  Jill A Rosenfeld; Blake C Ballif; Ann Lucas; Edward J Spence; Cynthia Powell; Arthur S Aylsworth; Beth A Torchia; Lisa G Shaffer
Journal:  PLoS One       Date:  2009-08-10       Impact factor: 3.240

8.  Distinct roles for histone methyltransferases G9a and GLP in cancer germ-line antigen gene regulation in human cancer cells and murine embryonic stem cells.

Authors:  Petra A Link; Omkaram Gangisetty; Smitha R James; Anna Woloszynska-Read; Makoto Tachibana; Yoichi Shinkai; Adam R Karpf
Journal:  Mol Cancer Res       Date:  2009-06-16       Impact factor: 5.852

9.  Human genomics. The human transcriptome across tissues and individuals.

Authors:  Marta Melé; Pedro G Ferreira; Ferran Reverter; David S DeLuca; Jean Monlong; Michael Sammeth; Taylor R Young; Jakob M Goldmann; Dmitri D Pervouchine; Timothy J Sullivan; Rory Johnson; Ayellet V Segrè; Sarah Djebali; Anastasia Niarchou; Fred A Wright; Tuuli Lappalainen; Miquel Calvo; Gad Getz; Emmanouil T Dermitzakis; Kristin G Ardlie; Roderic Guigó
Journal:  Science       Date:  2015-05-08       Impact factor: 47.728

10.  Spatio-temporal transcriptome of the human brain.

Authors:  Hyo Jung Kang; Yuka Imamura Kawasawa; Feng Cheng; Ying Zhu; Xuming Xu; Mingfeng Li; André M M Sousa; Mihovil Pletikos; Kyle A Meyer; Goran Sedmak; Tobias Guennel; Yurae Shin; Matthew B Johnson; Zeljka Krsnik; Simone Mayer; Sofia Fertuzinhos; Sheila Umlauf; Steven N Lisgo; Alexander Vortmeyer; Daniel R Weinberger; Shrikant Mane; Thomas M Hyde; Anita Huttner; Mark Reimers; Joel E Kleinman; Nenad Sestan
Journal:  Nature       Date:  2011-10-26       Impact factor: 49.962

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  12 in total

Review 1.  The Intricate Epigenetic and Transcriptional Alterations in Pediatric High-Grade Gliomas: Targeting the Crosstalk as the Oncogenic Achilles' Heel.

Authors:  Paul Huchedé; Pierre Leblond; Marie Castets
Journal:  Biomedicines       Date:  2022-06-03

2.  Dysregulation of Th1, Th2, Th17, and T regulatory cell-related transcription factor signaling in children with autism.

Authors:  Sheikh Fayaz Ahmad; Khairy M A Zoheir; Mushtaq Ahmad Ansari; Ahmed Nadeem; Saleh A Bakheet; Laila Yousef Al-Ayadhi; Mohammad Zeed Alzahrani; Othman A Al-Shabanah; Mohammed M Al-Harbi; Sabry M Attia
Journal:  Mol Neurobiol       Date:  2016-06-25       Impact factor: 5.590

3.  A Dual Noradrenergic Mechanism for the Relief of Neuropathic Allodynia by the Antidepressant Drugs Duloxetine and Amitriptyline.

Authors:  Mélanie Kremer; Ipek Yalcin; Yannick Goumon; Xavier Wurtz; Laurent Nexon; Dorothée Daniel; Salim Megat; Rhian A Ceredig; Carl Ernst; Gustavo Turecki; Virginie Chavant; Jean-François Théroux; Adrien Lacaud; Lauriane-Elisabeth Joganah; Vincent Lelievre; Dominique Massotte; Pierre-Eric Lutz; Ralf Gilsbach; Eric Salvat; Michel Barrot
Journal:  J Neurosci       Date:  2018-09-24       Impact factor: 6.167

4.  A Multistep Workflow to Evaluate Newly Generated iPSCs and Their Ability to Generate Different Cell Types.

Authors:  Carol X-Q Chen; Narges Abdian; Gilles Maussion; Rhalena A Thomas; Iveta Demirova; Eddie Cai; Mahdieh Tabatabaei; Lenore K Beitel; Jason Karamchandani; Edward A Fon; Thomas M Durcan
Journal:  Methods Protoc       Date:  2021-07-19

5.  Investigation of single-nucleotide variants in MBD5 associated with autism spectrum disorders and schizophrenia phenotypes.

Authors:  Kanako Ishizuka; Hiroki Kimura; Akira Yoshimi; Masahiro Banno; Itaru Kushima; Yota Uno; Takashi Okada; Daisuke Mori; Branko Aleksic; Norio Ozaki
Journal:  Nagoya J Med Sci       Date:  2016-12       Impact factor: 1.131

6.  Higher O-GlcNAc Levels Are Associated with Defects in Progenitor Proliferation and Premature Neuronal Differentiation during in-Vitro Human Embryonic Cortical Neurogenesis.

Authors:  Shama Parween; Divya S Varghese; Mustafa T Ardah; Ashok D Prabakaran; Eric Mensah-Brown; Bright Starling Emerald; Suraiya A Ansari
Journal:  Front Cell Neurosci       Date:  2017-12-21       Impact factor: 5.505

7.  The dynamic interactome and genomic targets of Polycomb complexes during stem-cell differentiation.

Authors:  Matthew M Makowski; H Irem Baymaz; Susan L Kloet; Lisa van Voorthuijsen; Ino D Karemaker; Alexandra Santanach; Pascal W T C Jansen; Luciano Di Croce; Michiel Vermeulen
Journal:  Nat Struct Mol Biol       Date:  2016-06-13       Impact factor: 15.369

8.  Specific pattern of maturation and differentiation in the formation of cortical tubers in tuberous sclerosis omplex (TSC): evidence from layer-specific marker expression.

Authors:  Angelika Mühlebner; Anand M Iyer; Jackelien van Scheppingen; Jasper J Anink; Floor E Jansen; Tim J Veersema; Kees P Braun; Wim G M Spliet; Wim van Hecke; Figen Söylemezoğlu; Martha Feucht; Pavel Krsek; Josef Zamecnik; Christian G Bien; Tilman Polster; Roland Coras; Ingmar Blümcke; Eleonora Aronica
Journal:  J Neurodev Disord       Date:  2016-04-01       Impact factor: 4.025

9.  Global long non-coding RNA expression in the rostral anterior cingulate cortex of depressed suicides.

Authors:  Yi Zhou; Pierre-Eric Lutz; Yu Chang Wang; Jiannis Ragoussis; Gustavo Turecki
Journal:  Transl Psychiatry       Date:  2018-10-18       Impact factor: 6.222

10.  The Dynamic Proteome of Oligodendrocyte Lineage Differentiation Features Planar Cell Polarity and Macroautophagy Pathways.

Authors:  Paria Pooyan; Razieh Karamzadeh; Mehdi Mirzaei; Anna Meyfour; Ardeshir Amirkhan; Yunqi Wu; Vivek Gupta; Hossein Baharvand; Mohammad Javan; Ghasem Hosseini Salekdeh
Journal:  Gigascience       Date:  2020-10-31       Impact factor: 6.524

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