Literature DB >> 26190081

Complete mitochondrial genome sequence of Garrulax formosus (Aves, Passeriformes, Timaliidae) and its phylogenetic analysis.

Zongjin Huan1,2, Yongfang Yao1, Yanyan Zhou1, Yu Qi1, Qiang Wang2, Diyan Li1, Meng Xie3, Qingyong Ni1, Mingwang Zhang1, Huailiang Xu1.   

Abstract

The complete mitochondrial genome of Garrulax formosus was obtained for the first time, which is 17 869 bp in length and contains 13 protein-coding genes (PCGs), 2 rRNA, 22 tRNA genes and 2 different control regions. All genes are distributed in plus strand, with the exceptions of one PCG (ND6) and eight tRNA genes. All PCGs are initiated with ATG, except for COX1, which is initiated with GTG, while stopped by five types of stop codons. All tRNA genes have the potential to fold into typical clover-leaf structure except tRNA(Ser)(GCT). According to the phylogenetic tree, we can infer that it is reasonable to divide Garrulax formosus into the genus Garrulax.

Entities:  

Keywords:  Garrulax formosus; Timaliidae; mitochondrial genome; phylogenetic analysis

Mesh:

Substances:

Year:  2015        PMID: 26190081     DOI: 10.3109/19401736.2015.1053128

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Mitochondrial genome of Stachyris ruficeps (Aves, Passeriformes, Timaliidae).

Authors:  Xiao-Ya Wu; Qin Zhao; Jun-Song Zhao; Yong-Fang Yao; Huai-Liang Xu
Journal:  Mitochondrial DNA B Resour       Date:  2016-03-28       Impact factor: 0.658

2.  New Insight into Parrots' Mitogenomes Indicates That Their Ancestor Contained a Duplicated Region.

Authors:  Adam Dawid Urantówka; Aleksandra Kroczak; Tony Silva; Rafael Zamora Padrón; Nuhacet Fernández Gallardo; Julie Blanch; Barry Blanch; Pawel Mackiewicz
Journal:  Mol Biol Evol       Date:  2018-12-01       Impact factor: 16.240

3.  Turdoides affinis mitogenome reveals the translational efficiency and importance of NADH dehydrogenase complex-I in the Leiothrichidae family.

Authors:  Indrani Sarkar; Prateek Dey; Sanjeev Kumar Sharma; Swapna Devi Ray; Venkata Hanumat Sastry Kochiganti; Renu Singh; Padmanabhan Pramod; Ram Pratap Singh
Journal:  Sci Rep       Date:  2020-10-01       Impact factor: 4.379

  3 in total

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