| Literature DB >> 26185532 |
Ting Zhang1, Shang Xie2, Jin-Hong Zhu3, Qi-Wen Li4, Jing He5, Ai-Ping Zeng1.
Abstract
Numerous studies have investigated the association of IL10 -819C>T and -592C>A polymorphisms with non-Hodgkin lymphoma (NHL) susceptibility, and yet reported conflicting results. With this in mind, we performed the current meta-analysis with an aim to verify actual causative variants underlying lymphomagenesis. Pooled odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to evaluate the strength of the associations. Moreover, to explore the biological function of these polymorphisms, we also performed genotype-based mRNA expression analysis using online database derived from 270 subjects within three ethnicities. The final analysis included 11 studies with a total of 5859 NHL cases and 6893 controls for the IL10 -819C>T polymorphism, and 11 studies with 6277 cases and 7350 controls for the IL10 -592C>A polymorphism. No significant association was observed for these two polymorphisms in either the overall analysis or the stratification analyses by ethnicity and source of controls. Nevertheless, stratification analyses demonstrated a significant decreased risk associated with the IL10 -819C>T polymorphism (homozygous: OR=0.81, 95% CI=0.66-0.99, and recessive model: OR=0.80, 95%CI=0.65-0.98) and IL10 -592C>A polymorphism (homozygous: OR=0.80, 95% CI=0.66-0.99, and recessive model: OR=0.80, 95%CI=0.66-0.97) among patients with diffuse large B-cell lymphoma (DLBCL). Despite some limitations, this meta-analysis indicates that polymorphisms in IL10 gene may contribute to DLBCL susceptibility.Entities:
Keywords: IL10; NHL; meta-analysis; polymorphism; susceptibility
Year: 2015 PMID: 26185532 PMCID: PMC4504106 DOI: 10.7150/jca.11745
Source DB: PubMed Journal: J Cancer ISSN: 1837-9664 Impact factor: 4.207
Characteristics of studies included in the current meta-analysis
| Surname | Year | Country | Ethnicity | Source | Genotype method | Case | Control | MAF | HWE | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC | CT | TT | All | CC | CT | TT | All | ||||||||
| Lech-Maranda | 2004 | France | Caucasian | HB | PCR-RFLP | 107 | 81 | 11 | 199 | 53 | 46 | 13 | 112 | 0.321 | 0.536 |
| Guzowski | 2005 | USA | Caucasian | HB | DHPLC | 9 | 6 | 2 | 17 | 14 | 10 | 1 | 25 | 0.24 | 0.629 |
| Lan | 2006 | USA | Mixed | PB | TaqMan | 274 | 191 | 26 | 491 | 329 | 211 | 34 | 574 | 0.243 | 0.982 |
| Persico | 2006 | Italy | Caucasian | PB | PCR-RFLP | 138 | 100 | 12 | 250 | 53 | 51 | 6 | 110 | 0.286 | 0.159 |
| Wang | 2006 | USA | Mixed | PB | TaqMan | 625 | 427 | 92 | 1144 | 514 | 339 | 81 | 934 | 0.268 | 0.021 |
| Kube | 2007 | Germany | Caucasian | NA | NA | 230 | 167 | 21 | 418 | 111 | 81 | 10 | 202 | 0.25 | 0.325 |
| Lech-Maranda | 2007 | France | Caucasian | HB | PCR-RFLP | 92 | 68 | 15 | 175 | 53 | 46 | 13 | 112 | 0.321 | 0.536 |
| Purdue | 2007 | Australia | Caucasian | PB | TaqMan | 342 | 175 | 41 | 558 | 295 | 170 | 23 | 488 | 0.221 | 0.813 |
| Andrie | 2009 | Greece | Caucasian | HB | ARMS-PCR | 22 | 20 | 6 | 48 | 45 | 35 | 5 | 85 | 0.265 | 0.594 |
| Wong | 2010 | USA | Mixed | HB | TaqMan | 109 | 47 | 2 | 158 | 88 | 57 | 9 | 154 | 0.244 | 0.954 |
| Hosgood | 2013 | Asia | Asian | HB | TaqMan | 1193 | 971 | 237 | 2401 | 2033 | 1700 | 364 | 4097 | 0.296 | 0.749 |
| CC | AC | AA | All | CC | AC | AA | All | ||||||||
| Lech-Maranda | 2004 | France | Caucasian | HB | PCR-RFLP | 107 | 81 | 11 | 199 | 53 | 46 | 13 | 112 | 0.321 | 0.536 |
| Guzowski | 2005 | USA | Caucasian | HB | DHPLC | 10 | 5 | 2 | 17 | 13 | 10 | 2 | 25 | 0.280 | 0.968 |
| Lan | 2006 | USA | Mixed | PB | TaqMan | 273 | 174 | 35 | 482 | 331 | 189 | 43 | 563 | 0.244 | 0.032 |
| Persico | 2006 | Italy | Caucasian | PB | PCR-RFLP | 138 | 100 | 12 | 250 | 53 | 51 | 6 | 110 | 0.286 | 0.159 |
| Wang | 2006 | USA | Mixed | PB | TaqMan | 601 | 426 | 93 | 1120 | 515 | 342 | 81 | 938 | 0.269 | 0.027 |
| Kube | 2007 | Germany | Caucasian | NA | NA | 226 | 165 | 21 | 412 | 111 | 81 | 10 | 202 | 0.250 | 0.325 |
| Lech-Maranda | 2007 | France | Caucasian | HB | PCR-RFLP | 92 | 68 | 15 | 175 | 53 | 46 | 13 | 112 | 0.321 | 0.536 |
| Purdue | 2007 | Australia | Caucasian | PB | TaqMan | 343 | 176 | 21 | 540 | 297 | 169 | 23 | 489 | 0.22 | 0.868 |
| Wong | 2010 | USA | Mixed | HB | TaqMan | 107 | 49 | 11 | 167 | 88 | 57 | 9 | 154 | 0.244 | 0.954 |
| Zhang | 2012 | China | Asian | HB | TaqMan | 226 | 228 | 60 | 514 | 269 | 235 | 53 | 557 | 0.306 | 0.872 |
| Hosgood | 2013 | Asia | Asian | HB | TaqMan | 1204 | 961 | 236 | 2401 | 2041 | 1685 | 362 | 4088 | 0.295 | 0.593 |
PB, Population based; HB, Hospital based; PCR-RFLP, polymorphism chain reaction-restriction fragment length polymorphism; DHPLC, denaturing high-performance liquid chromatography; MAF, minor allele frequency; HWE, Hardy-Weinberg equilibrium.
Meta-analysis of the association between IL10 polymorphisms and NHL risk
| Variables | No. of | Sample size | Homozygous | Heterozygous | Recessive | Dominant | Allele comparing | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| studies | OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||
| TT vs. CC | CT vs. CC | TT vs. (CT + CC) | (CT + TT) vs. CC | T vs. C | ||||||||
| All | 11 | 5859/6893 | 0.97 (0.76-1.22) | 0.094 | 0.97 (0.90-1.04) | 0.821 | 1.04 (0.92-1.19) | 0.108 | 0.98 (0.91-1.05) | 0.558 | 0.99 (0.94-1.05) | 0.184 |
| Ethnicity | ||||||||||||
| Caucasian | 7 | 1665/1134 | 0.99 (0.63-1.55) | 0.118 | 0.90 (0.76-1.06) | 0.964 | 1.07 (0.79-1.46) | 0.132 | 0.92 (0.79-1.07) | 0.800 | 0.96 (0.85-1.09) | 0.365 |
| Asian | 1 | 2401/4097 | 1.10 (0.93-1.33) | / | 0.97 (0.88-1.08) | / | 1.12 (0.95-1.33) | / | 1.00 (0.90-1.10) | / | 1.02 (0.95-1.11) | / |
| Mixed | 3 | 1793/1662 | 0.80 (0.48-1.32) | 0.124 | 1.01 (0.88-1.17) | 0.190 | 0.86 (0.66-1.12) | 0.177 | 0.99 (0.86-1.13) | 0.086 | 0.97 (0.87-1.08) | 0.047 |
| Source of control | ||||||||||||
| PB | 4 | 2443/2106 | 1.02 (0.80-1.29) | 0.392 | 0.99 (0.87-1.12) | 0.430 | 1.02 (0.81-1.29) | 0.306 | 1.00 (0.88-1.12) | 0.603 | 1.00 (0.91-1.10) | 0.689 |
| HB | 6 | 2998/4585 | 0.80 (0.44-1.46) | 0.022 | 0.95 (0.86-1.05) | 0.712 | 1.05 (0.90-1.24) | 0.034 | 0.97 (0.88-1.06) | 0.244 | 0.99 (0.92-1.06) | 0.031 |
| Subtype | ||||||||||||
| DLBCL | 5 | 1997/6205 | 0.510 | 1.02 (0.92-1.14) | 0.396 | 0.535 | 0.99 (0.89-1.09) | 0.369 | 0.95 (0.88-1.03) | 0.374 | ||
| FL | 5 | 932/6205 | 1.00 (0.76-1.32) | 0.258 | 1.03 (0.88-1.20) | 0.223 | 1.00 (0.76-1.31) | 0.333 | 1.02 (0.89-1.19) | 0.161 | 1.02 (0.90-1.14) | 0.140 |
| AA vs. CC | AC vs. CC | AA vs. (AC + CC) | (AC + AA) vs. CC | A vs. C | ||||||||
| Alla | 11 | 6277/7350 | 1.04 (0.91-1.18) | 0.565 | 0.98 (0.92-1.06) | 0.652 | 1.04 (0.92-1.18) | 0.652 | 0.99 (0.93-1.06) | 0.542 | 1.00 (0.95-1.06) | 0.435 |
| Ethnicity | ||||||||||||
| Caucasian | 6 | 1593/1050 | 0.74 (0.52-1.04) | 0.743 | 0.89 (0.75-1.05) | 0.946 | 0.78 (0.55-1.09) | 0.739 | 0.87 (0.74-1.02) | 0.915 | 0.88 (0.77-1.00) | 0.824 |
| Asian | 2 | 2915/4645 | 1.14 (0.97-1.34) | 0.385 | 0.99 (0.90-1.10) | 0.206 | 1.14 (0.98-1.34) | 0.603 | 1.02 (0.93-1.12) | 0.169 | 1.04 (0.97-1.12) | 0.196 |
| Mixed | 3 | 1769/1655 | 0.99 (0.76-1.27) | 0.999 | 1.04 (0.90-1.20) | 0.235 | 0.97 (0.75-1.24) | 0.936 | 1.03 (0.90-1.18) | 0.329 | 1.01 (0.91-1.13) | 0.565 |
| Source of control | ||||||||||||
| PB | 4 | 2392/2100 | 0.94 (0.74-1.19) | 0.902 | 1.01 (0.89-1.15) | 0.366 | 0.93 (0.74-1.17) | 0.974 | 1.00 (0.89-1.12) | 0.367 | 0.99 (0.90-1.09) | 0.492 |
| HB | 6 | 3473/5048 | 1.08 (0.93-1.26) | 0.209 | 0.97 (0.88-1.06) | 0.508 | 1.09 (0.94-1.27) | 0.286 | 0.99 (0.91-1.08) | 0.336 | 1.01 (0.94-1.08) | 0.187 |
| Subtype | ||||||||||||
| DLBCL | 5 | 1986/6190 | 0.510 | 1.02 (0.91-1.13) | 0.363 | 0.498 | 0.98 (0.88-1.08) | 0.399 | 0.95 (0.87-1.03) | 0.448 | ||
| FL | 5 | 934/6190 | 1.08 (0.83-1.42) | 0.164 | 1.02 (0.88-1.19) | 0.375 | 1.08 (0.83-1.40) | 0.258 | 1.03 (0.89-1.19) | 0.199 | 1.03 (0.92-1.16) | 0.098 |
HB, Hospital based; PB, Population based; DLBCL, Diffuse large B-cell lymphomas; FL, Follicular lymphoma.
IL10 mRNA expression by the genotypes of SNPs, using data from the HapMapa
| Population | -819C>T (rs1800871) | -592C>A (rs1800872) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| genotypes | No. | Mean ± SD | genotypes | No. | Mean ± SD | |||||
| Caucasiand | CC | 52 | 7.77 ± 0.49 | 0.106 | CC | 54 | 7.78 ± 0.50 | 0.070 | ||
| CT | 28 | 8.02 ± 0.59 | AC | 33 | 8.04 ± 0.61 | |||||
| TT | 1 | 7.55 | 0.668 | AA | 2 | 8.21 ± 0.93 | 0.246 | |||
| Dominant | 29 | 8.00 ± 0.58 | 0.053 | Dominant | 35 | 8.05 ± 0.61 | ||||
| Africand | CC | 24 | 7.60 ± 0.53 | 0.369 | CC | 24 | 7.60 ± 0.53 | 0.449 | ||
| CT | 43 | 7.76 ± 0.46 | 0.196 | AC | 48 | 7.75 ± 0.45 | 0.219 | |||
| TT | 17 | 7.64 ± 0.43 | 0.793 | AA | 18 | 7.68 ± 0.44 | 0.617 | |||
| Dominant | 60 | 7.73 ± 0.45 | 0.269 | Dominant | 66 | 7.73 ± 0.45 | 0.252 | |||
| Asiand | CC | 6 | 7.41 ± 0.52 | 0.217 | CC | 6 | 7.41 ± 0.52 | 0.151 | ||
| CT | 33 | 7.57 ± 0.40 | 0.373 | AC | 39 | 7.57 ± 0.40 | 0.375 | |||
| TT | 40 | 7.70 ± 0.45 | 0.153 | AA | 44 | 7.71 ± 0.45 | 0.133 | |||
| Dominant | 73 | 7.64 ± 0.43 | 0.207 | Dominant | 83 | 7.64 ± 0.43 | 0.200 | |||
| Alld | CC | 82 | 7.69 ± 0.51 | 0.403 | CC | 84 | 7.70 ± 0.52 | 0.575 | ||
| CT | 104 | 7.77 ± 0.50 | 0.283 | AC | 120 | 7.77 ± 0.52 | 0.334 | |||
| TT | 58 | 7.68 ± 0.44 | 0.889 | AA | 64 | 7.72 ± 0.46 | 0.843 | |||
| Dominant | 162 | 7.74 ± 0.48 | 0.475 | Dominant | 184 | 7.75 ± 0.50 | 0.433 | |||
a Genotyping data and mRNA expression levels for IL10 by genotypes were obtained from the HapMap phase II release 23 data from EBV-transformed lymphoblastoid cell lines from 270 individuals.
b Two-side Student's t test within the stratum.
c P values for the trend test of IL10 mRNA expression among 3 genotypes for each SNP from a general linear model.
d There were missing data because genotyping data were not available.