Literature DB >> 26185089

Glycolysis for Microbiome Generation.

Alan J Wolfe1.   

Abstract

For a generation of microbiologists who study pathogenesis in the context of the human microbiome, understanding the diversity of bacterial metabolism is essential. In this chapter, I briefly describe how and why I became, and remain, interested in metabolism. I then will describe and compare some of the strategies used by bacteria to consume sugars as one example of metabolic diversity. I will end with a plea to embrace metabolism in the endeavor to understand pathogenesis.

Entities:  

Mesh:

Year:  2015        PMID: 26185089      PMCID: PMC4507297          DOI: 10.1128/microbiolspec.MBP-0014-2014

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  106 in total

1.  From 'reactive C2 units' to acetyl coenzyme A: a long trail with an acetyl phosphate detour.

Authors:  R Bentley
Journal:  Trends Biochem Sci       Date:  2000-06       Impact factor: 13.807

2.  On the origin of cancer cells.

Authors:  O WARBURG
Journal:  Science       Date:  1956-02-24       Impact factor: 47.728

3.  Co-regulation of acetylation and phosphorylation of CheY, a response regulator in chemotaxis of Escherichia coli.

Authors:  Rina Barak; Michael Eisenbach
Journal:  J Mol Biol       Date:  2004-09-10       Impact factor: 5.469

Review 4.  The acetate switch.

Authors:  Alan J Wolfe
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

5.  Acetylation at Lys-92 enhances signaling by the chemotaxis response regulator protein CheY.

Authors:  R Ramakrishnan; M Schuster; R B Bourret
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

6.  Expression of the xylulose 5-phosphate phosphoketolase gene, xpkA, from Lactobacillus pentosus MD363 is induced by sugars that are fermented via the phosphoketolase pathway and is repressed by glucose mediated by CcpA and the mannose phosphoenolpyruvate phosphotransferase system.

Authors:  Clara C Posthuma; Rechien Bader; Roswitha Engelmann; Pieter W Postma; Wolfgang Hengstenberg; Peter H Pouwels
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

Review 7.  Physiologically relevant small phosphodonors link metabolism to signal transduction.

Authors:  Alan J Wolfe
Journal:  Curr Opin Microbiol       Date:  2010-01-29       Impact factor: 7.934

Review 8.  The Warburg and Crabtree effects: On the origin of cancer cell energy metabolism and of yeast glucose repression.

Authors:  Rodrigo Diaz-Ruiz; Michel Rigoulet; Anne Devin
Journal:  Biochim Biophys Acta       Date:  2010-09-08

9.  Dynamics and associations of microbial community types across the human body.

Authors:  Tao Ding; Patrick D Schloss
Journal:  Nature       Date:  2014-04-16       Impact factor: 49.962

10.  Phosphorylated CpxR restricts production of the RovA global regulator in Yersinia pseudotuberculosis.

Authors:  Junfa Liu; Ikenna R Obi; Edvin J Thanikkal; Thomas Kieselbach; Matthew S Francis
Journal:  PLoS One       Date:  2011-08-18       Impact factor: 3.240

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  10 in total

1.  Metabolic Reprogramming of Vibrio cholerae Impaired in Respiratory NADH Oxidation Is Accompanied by Increased Copper Sensitivity.

Authors:  Charlotte Toulouse; Kristina Metesch; Jens Pfannstiel; Julia Steuber
Journal:  J Bacteriol       Date:  2018-07-10       Impact factor: 3.490

2.  Metabolomics Study of the Synergistic Killing of Polymyxin B in Combination with Amikacin against Polymyxin-Susceptible and -Resistant Pseudomonas aeruginosa.

Authors:  Maytham Hussein; Mei-Ling Han; Yan Zhu; Qi Zhou; Yu-Wei Lin; Robert E W Hancock; Daniel Hoyer; Darren J Creek; Jian Li; Tony Velkov
Journal:  Antimicrob Agents Chemother       Date:  2019-12-20       Impact factor: 5.191

Review 3.  Bacterial protein acetylation: new discoveries unanswered questions.

Authors:  Alan J Wolfe
Journal:  Curr Genet       Date:  2015-12-12       Impact factor: 3.886

Review 4.  Beyond mitochondria: Alternative energy-producing pathways from all strata of life.

Authors:  Christopher Auger; Roohi Vinaik; Vasu D Appanna; Marc G Jeschke
Journal:  Metabolism       Date:  2021-02-23       Impact factor: 8.694

5.  Human milk microbiota associated with early colonization of the neonatal gut in Mexican newborns.

Authors:  Karina Corona-Cervantes; Igrid García-González; Loan Edel Villalobos-Flores; Fernando Hernández-Quiroz; Alberto Piña-Escobedo; Carlos Hoyo-Vadillo; Martín Noé Rangel-Calvillo; Jaime García-Mena
Journal:  PeerJ       Date:  2020-05-22       Impact factor: 2.984

Review 6.  Mechanisms, Detection, and Relevance of Protein Acetylation in Prokaryotes.

Authors:  D G Christensen; J T Baumgartner; X Xie; K M Jew; N Basisty; B Schilling; M L Kuhn; A J Wolfe
Journal:  mBio       Date:  2019-04-09       Impact factor: 7.867

7.  Supply of Methionine During Late-Pregnancy Alters Fecal Microbiota and Metabolome in Neonatal Dairy Calves Without Changes in Daily Feed Intake.

Authors:  Ahmed Elolimy; Abdulrahman Alharthi; Mohamed Zeineldin; Claudia Parys; Ariane Helmbrecht; Juan J Loor
Journal:  Front Microbiol       Date:  2019-09-19       Impact factor: 5.640

8.  Unique mechanistic insights into pathways associated with the synergistic activity of polymyxin B and caspofungin against multidrug-resistant Klebsiella pneumoniae.

Authors:  Maytham Hussein; Labell J M Wong; Jinxin Zhao; Vanessa E Rees; Rafah Allobawi; Rajnikant Sharma; Gauri G Rao; Mark Baker; Jian Li; Tony Velkov
Journal:  Comput Struct Biotechnol J       Date:  2022-02-25       Impact factor: 7.271

9.  Metabolomic profiling of polymyxin-B in combination with meropenem and sulbactam against multi-drug resistant Acinetobacter baumannii.

Authors:  Shixing Zhu; Jiayuan Zhang; Chu Song; Yuwei Liu; Charles Oo; M Tobias Heinrichs; Zhihua Lv; Yuanqi Zhu; Sherwin K B Sy; Pan Deng; Mingming Yu
Journal:  Front Microbiol       Date:  2022-09-23       Impact factor: 6.064

10.  Large-scale conformational changes and redistribution of surface negative charge upon sugar binding dictate the fidelity of phosphorylation in Vibrio cholerae fructokinase.

Authors:  Rakhi Paul; Shramana Chatterjee; Seema Nath; Udayaditya Sen
Journal:  Sci Rep       Date:  2018-11-16       Impact factor: 4.379

  10 in total

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