Literature DB >> 26183914

An improved classification of foci for carcinogenicity testing by statistical descriptors.

Giulia Callegaro1, Federico Mattia Stefanini2, Annamaria Colacci3, Monica Vaccari3, Chiara Urani4.   

Abstract

Carcinogenesis is a multi-step process involving genetic alterations and non-genotoxic mechanisms. The in vitro cell transformation assay (CTA) is a promising tool for both genotoxic and non-genotoxic carcinogenesis. CTA relies on the ability of cells (e.g. BALB/c 3T3 mouse embryo fibroblasts) to develop a transformed phenotype after the treatment with suspected carcinogens. The classification of the transformed phenotype is based on coded morphological features, which are scored under a light microscope by trained experts. This procedure is time-consuming and somewhat prone to subjectivity. Herewith we provide a promising approach based on image analysis to support the scoring of malignant foci in BALB/c 3T3 CTA. The image analysis system is a quantitative approach, based on measuring features of malignant foci: dimension, multilayered growth, and invasivity into the surrounding monolayer of non-transformed cells. A logistic regression model was developed to estimate the probability for each focus to be transformed as a function of three statistical image descriptors. The estimated sensitivity of the derived classifier (untransformed against Type III) was 0.9, with an Area Under the Curve (AUC) value equal to 0.90 under the Receiver Operating Characteristics (ROC) curve.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  BALB/c 3T3 cell line; Cell transformation assay; Statistical image descriptors; foci; foci classification

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Year:  2015        PMID: 26183914     DOI: 10.1016/j.tiv.2015.07.013

Source DB:  PubMed          Journal:  Toxicol In Vitro        ISSN: 0887-2333            Impact factor:   3.500


  1 in total

1.  Deep neural network for the determination of transformed foci in Bhas 42 cell transformation assay.

Authors:  Minami Masumoto; Ittetsu Fukuda; Suguru Furihata; Takahiro Arai; Tatsuto Kageyama; Kiyomi Ohmori; Shinichi Shirakawa; Junji Fukuda
Journal:  Sci Rep       Date:  2021-12-02       Impact factor: 4.379

  1 in total

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