Literature DB >> 26183190

Single cells get together: High-resolution approaches to study the dynamics of early mouse development.

Néstor Saiz1, Berenika Plusa2, Anna-Katerina Hadjantonakis3.   

Abstract

Embryonic development is a complex and highly dynamic process during which individual cells interact with one another, adopt different identities and organize themselves in three-dimensional space to generate an entire organism. Recent technical developments in genomics and high-resolution quantitative imaging are making it possible to study cellular populations at single-cell resolution and begin to integrate different inputs, for example genetic, physical and chemical factors, that affect cell differentiation over spatial and temporal scales. The preimplantation mouse embryo allows the analysis of cell fate decisions in vivo with high spatiotemporal resolution. In this review we highlight how the application of live imaging and single-cell resolution analysis pipelines is providing an unprecedented level of insight on the processes that shape the earliest stages of mammalian development.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Genomics; Lineage specification; Mouse embryo; Quantitative high-resolution imaging; Single-cell analysis; Systems biology

Mesh:

Year:  2015        PMID: 26183190      PMCID: PMC4688173          DOI: 10.1016/j.semcdb.2015.06.004

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  106 in total

1.  Successful development and birth of mice cultivated in vitro as early as early embryos.

Authors:  A McLAREN; J D BIGGERS
Journal:  Nature       Date:  1958-09-27       Impact factor: 49.962

2.  Primitive endoderm differentiates via a three-step mechanism involving Nanog and RTK signaling.

Authors:  Stephen Frankenberg; François Gerbe; Sylvain Bessonnard; Corinne Belville; Pierre Pouchin; Olivier Bardot; Claire Chazaud
Journal:  Dev Cell       Date:  2011-12-13       Impact factor: 12.270

3.  Visualization of dynamics of single endogenous mRNA labeled in live mouse.

Authors:  Hye Yoon Park; Hyungsik Lim; Young J Yoon; Antonia Follenzi; Chiso Nwokafor; Melissa Lopez-Jones; Xiuhua Meng; Robert H Singer
Journal:  Science       Date:  2014-01-24       Impact factor: 47.728

Review 4.  Transcriptomics in the RNA-seq era.

Authors:  Paul A McGettigan
Journal:  Curr Opin Chem Biol       Date:  2013-01-02       Impact factor: 8.822

5.  The endoderm of the mouse embryo arises by dynamic widespread intercalation of embryonic and extraembryonic lineages.

Authors:  Gloria S Kwon; Manuel Viotti; Anna-Katerina Hadjantonakis
Journal:  Dev Cell       Date:  2008-10       Impact factor: 12.270

Review 6.  Anatomy of a blastocyst: cell behaviors driving cell fate choice and morphogenesis in the early mouse embryo.

Authors:  Nadine Schrode; Panagiotis Xenopoulos; Anna Piliszek; Stephen Frankenberg; Berenika Plusa; Anna-Katerina Hadjantonakis
Journal:  Genesis       Date:  2013-02-25       Impact factor: 2.487

7.  Visualizing spatiotemporal dynamics of multicellular cell-cycle progression.

Authors:  Asako Sakaue-Sawano; Hiroshi Kurokawa; Toshifumi Morimura; Aki Hanyu; Hiroshi Hama; Hatsuki Osawa; Saori Kashiwagi; Kiyoko Fukami; Takaki Miyata; Hiroyuki Miyoshi; Takeshi Imamura; Masaharu Ogawa; Hisao Masai; Atsushi Miyawaki
Journal:  Cell       Date:  2008-02-08       Impact factor: 41.582

8.  Cell-surface proteomics identifies lineage-specific markers of embryo-derived stem cells.

Authors:  Peter J Rugg-Gunn; Brian J Cox; Fredrik Lanner; Parveen Sharma; Vladimir Ignatchenko; Angela C H McDonald; Jodi Garner; Anthony O Gramolini; Janet Rossant; Thomas Kislinger
Journal:  Dev Cell       Date:  2012-03-15       Impact factor: 12.270

Review 9.  Early cell fate decisions in the mouse embryo.

Authors:  Néstor Saiz; Berenika Plusa
Journal:  Reproduction       Date:  2013-03-01       Impact factor: 3.906

10.  An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis.

Authors:  Kazuki Kurimoto; Yukihiro Yabuta; Yasuhide Ohinata; Yukiko Ono; Kenichiro D Uno; Rikuhiro G Yamada; Hiroki R Ueda; Mitinori Saitou
Journal:  Nucleic Acids Res       Date:  2006-03-17       Impact factor: 16.971

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  4 in total

1.  Quantitative Analysis of Protein Expression to Study Lineage Specification in Mouse Preimplantation Embryos.

Authors:  Nestor Saiz; Minjung Kang; Nadine Schrode; Xinghua Lou; Anna-Katerina Hadjantonakis
Journal:  J Vis Exp       Date:  2016-02-22       Impact factor: 1.355

2.  Rapid and efficient degradation of endogenous proteins in vivo identifies stage-specific roles of RNA Pol II pausing in mammalian development.

Authors:  Abderhman Abuhashem; Andrew S Lee; Alexandra L Joyner; Anna-Katerina Hadjantonakis
Journal:  Dev Cell       Date:  2022-04-13       Impact factor: 13.417

3.  Real-time prediction of cell division timing in developing zebrafish embryo.

Authors:  Satoshi Kozawa; Takashi Akanuma; Tetsuo Sato; Yasuomi D Sato; Kazushi Ikeda; Thomas N Sato
Journal:  Sci Rep       Date:  2016-09-06       Impact factor: 4.379

4.  The transition from local to global patterns governs the differentiation of mouse blastocysts.

Authors:  Sabine C Fischer; Elena Corujo-Simon; Joaquin Lilao-Garzon; Ernst H K Stelzer; Silvia Muñoz-Descalzo
Journal:  PLoS One       Date:  2020-05-15       Impact factor: 3.240

  4 in total

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