Literature DB >> 26175431

Generation of a conditional analog-sensitive kinase in human cells using CRISPR/Cas9-mediated genome engineering.

Tyler C Moyer1, Andrew J Holland1.   

Abstract

The ability to rapidly and specifically modify the genome of mammalian cells has been a long-term goal of biomedical researchers. Recently, the clustered, regularly interspaced, short palindromic repeats (CRISPR)/Cas9 system from bacteria has been exploited for genome engineering in human cells. The CRISPR system directs the RNA-guided Cas9 nuclease to a specific genomic locus to induce a DNA double-strand break that may be subsequently repaired by homology-directed repair using an exogenous DNA repair template. Here we describe a protocol using CRISPR/Cas9 to achieve bi-allelic insertion of a point mutation in human cells. Using this method, homozygous clonal cell lines can be constructed in 5-6 weeks. This method can also be adapted to insert larger DNA elements, such as fluorescent proteins and degrons, at defined genomic locations. CRISPR/Cas9 genome engineering offers exciting applications in both basic science and translational research.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Analog-sensitive kinase; CRISPR; Centrosome; Chemical genetics; Genome editing; Plk4

Mesh:

Substances:

Year:  2015        PMID: 26175431      PMCID: PMC4629829          DOI: 10.1016/bs.mcb.2015.03.017

Source DB:  PubMed          Journal:  Methods Cell Biol        ISSN: 0091-679X            Impact factor:   1.441


  29 in total

Review 1.  Altering the genome by homologous recombination.

Authors:  M R Capecchi
Journal:  Science       Date:  1989-06-16       Impact factor: 47.728

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Journal:  Nat Biotechnol       Date:  2007-07-01       Impact factor: 54.908

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Authors:  P Rouet; F Smih; M Jasin
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Authors:  A Plessis; A Perrin; J E Haber; B Dujon
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Authors:  A C Bishop; J A Ubersax; D T Petsch; D P Matheos; N S Gray; J Blethrow; E Shimizu; J Z Tsien; P G Schultz; M D Rose; J L Wood; D O Morgan; K M Shokat
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Authors:  N Rudin; E Sugarman; J E Haber
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7.  Precision genome editing using synthesis-dependent repair of Cas9-induced DNA breaks.

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