Literature DB >> 26172507

Change in heat capacity accurately predicts vibrational coupling in enzyme catalyzed reactions.

Vickery L Arcus1, Christopher R Pudney2.   

Abstract

The temperature dependence of kinetic isotope effects (KIEs) have been used to infer the vibrational coupling of the protein and or substrate to the reaction coordinate, particularly in enzyme-catalyzed hydrogen transfer reactions. We find that a new model for the temperature dependence of experimentally determined observed rate constants (macromolecular rate theory, MMRT) is able to accurately predict the occurrence of vibrational coupling, even where the temperature dependence of the KIE fails. This model, that incorporates the change in heat capacity for enzyme catalysis, demonstrates remarkable consistency with both experiment and theory and in many respects is more robust than models used at present.
Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Catalysis; Enzyme dynamics; Heat capacity; Promoting motion; Vibrational coupling

Mesh:

Substances:

Year:  2015        PMID: 26172507     DOI: 10.1016/j.febslet.2015.06.042

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  5 in total

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Journal:  Chembiochem       Date:  2022-05-24       Impact factor: 3.461

2.  Linear Eyring Plots Conceal a Change in the Rate-Limiting Step in an Enzyme Reaction.

Authors:  Teresa F G Machado; Tracey M Gloster; Rafael G da Silva
Journal:  Biochemistry       Date:  2018-11-27       Impact factor: 3.162

3.  Nonequivalence of Second Sphere "Noncatalytic" Residues in Pentaerythritol Tetranitrate Reductase in Relation to Local Dynamics Linked to H-Transfer in Reactions with NADH and NADPH Coenzymes.

Authors:  Andreea I Iorgu; Nicola J Baxter; Matthew J Cliff; Colin Levy; Jonathan P Waltho; Sam Hay; Nigel S Scrutton
Journal:  ACS Catal       Date:  2018-10-26       Impact factor: 13.084

4.  Protein Conformational Change Is Essential for Reductive Activation of Lytic Polysaccharide Monooxygenase by Cellobiose Dehydrogenase.

Authors:  Erik Breslmayr; Christophe V F P Laurent; Stefan Scheiblbrandner; Anita Jerkovic; Derren J Heyes; Chris Oostenbrink; Roland Ludwig; Tobias M Hedison; Nigel S Scrutton; Daniel Kracher
Journal:  ACS Catal       Date:  2020-03-30       Impact factor: 13.700

5.  Chemical Mapping Exposes the Importance of Active Site Interactions in Governing the Temperature Dependence of Enzyme Turnover.

Authors:  Samuel D Winter; Hannah B L Jones; Dora M Răsădean; Rory M Crean; Michael J Danson; G Dan Pantoş; Gergely Katona; Erica Prentice; Vickery L Arcus; Marc W van der Kamp; Christopher R Pudney
Journal:  ACS Catal       Date:  2021-11-29       Impact factor: 13.084

  5 in total

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