Literature DB >> 26172210

Tree diversity and species identity effects on soil fungi, protists and animals are context dependent.

Leho Tedersoo1, Mohammad Bahram2, Tomáš Cajthaml3,4, Sergei Põlme1, Indrek Hiiesalu2, Sten Anslan2, Helery Harend2, Franz Buegger5, Karin Pritsch5, Julia Koricheva6, Kessy Abarenkov1.   

Abstract

Plant species richness and the presence of certain influential species (sampling effect) drive the stability and functionality of ecosystems as well as primary production and biomass of consumers. However, little is known about these floristic effects on richness and community composition of soil biota in forest habitats owing to methodological constraints. We developed a DNA metabarcoding approach to identify the major eukaryote groups directly from soil with roughly species-level resolution. Using this method, we examined the effects of tree diversity and individual tree species on soil microbial biomass and taxonomic richness of soil biota in two experimental study systems in Finland and Estonia and accounted for edaphic variables and spatial autocorrelation. Our analyses revealed that the effects of tree diversity and individual species on soil biota are largely context dependent. Multiple regression and structural equation modelling suggested that biomass, soil pH, nutrients and tree species directly affect richness of different taxonomic groups. The community composition of most soil organisms was strongly correlated due to similar response to environmental predictors rather than causal relationships. On a local scale, soil resources and tree species have stronger effect on diversity of soil biota than tree species richness per se.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26172210      PMCID: PMC4737927          DOI: 10.1038/ismej.2015.116

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  72 in total

1.  Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity.

Authors:  S Y Moon-van der Staay; R De Wachter; D Vaulot
Journal:  Nature       Date:  2001-02-01       Impact factor: 49.962

2.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

Review 3.  Ecological linkages between aboveground and belowground biota.

Authors:  David A Wardle; Richard D Bardgett; John N Klironomos; Heikki Setälä; Wim H van der Putten; Diana H Wall
Journal:  Science       Date:  2004-06-11       Impact factor: 47.728

4.  Identification of astigmatid mites using the second internal transcribed spacer (ITS2) region and its application for phylogenetic study.

Authors:  Koji Noge; Naoki Mori; Chihiro Tanaka; Ritsuo Nishida; Mitsuya Tsuda; Yasumasa Kuwahara
Journal:  Exp Appl Acarol       Date:  2005       Impact factor: 2.132

5.  Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays.

Authors:  Noah Fierer; Jason A Jackson; Rytas Vilgalys; Robert B Jackson
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

6.  Effects of biodiversity on the functioning of trophic groups and ecosystems.

Authors:  Bradley J Cardinale; Diane S Srivastava; J Emmett Duffy; Justin P Wright; Amy L Downing; Mahesh Sankaran; Claire Jouseau
Journal:  Nature       Date:  2006-10-26       Impact factor: 49.962

7.  Influence of phylogeny on fungal community assembly and ecosystem functioning.

Authors:  Hafiz Maherali; John N Klironomos
Journal:  Science       Date:  2007-06-22       Impact factor: 47.728

Review 8.  Is there a molecular key to the level of "biological species" in eukaryotes? A DNA guide.

Authors:  Annette W Coleman
Journal:  Mol Phylogenet Evol       Date:  2008-10-21       Impact factor: 4.286

9.  Phosphorus source alters host plant response to ectomycorrhizal diversity.

Authors:  James W Baxter; John Dighton
Journal:  Mycorrhiza       Date:  2005-04-05       Impact factor: 3.387

10.  The mycorrhizal contribution to plant productivity, plant nutrition and soil structure in experimental grassland.

Authors:  Marcel G A van der Heijden; Ruth Streitwolf-Engel; Ralph Riedl; Sabine Siegrist; Angelica Neudecker; Kurt Ineichen; Thomas Boller; Andres Wiemken; Ian R Sanders
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

View more
  41 in total

1.  Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment.

Authors:  Mohammad Bahram; Petr Kohout; Sten Anslan; Helery Harend; Kessy Abarenkov; Leho Tedersoo
Journal:  ISME J       Date:  2015-09-22       Impact factor: 10.302

2.  Opposing phylogenetic diversity gradients of plant and soil bacterial communities.

Authors:  Marta Goberna; Jose A Navarro-Cano; Miguel Verdú
Journal:  Proc Biol Sci       Date:  2016-02-24       Impact factor: 5.349

3.  Determinants of Soil Bacterial and Fungal Community Composition Toward Carbon-Use Efficiency Across Primary and Secondary Forests in a Costa Rican Conservation Area.

Authors:  Katie M McGee; William D Eaton; Shadi Shokralla; Mehrdad Hajibabaei
Journal:  Microb Ecol       Date:  2018-06-01       Impact factor: 4.552

Review 4.  Analysis of Microbial Diversity and Community Structure of Peanut Pod and Its Surrounding Soil in Peanut Rot Epidemic Area.

Authors:  Meijing He; Weiming Sun; Shunli Cui; Guojun Mu; Lifeng Liu; Wei Guo
Journal:  Curr Microbiol       Date:  2021-04-20       Impact factor: 2.188

5.  Ectomycorrhizal fungal communities in high mountain conifer forests in central Mexico and their potential use in the assisted migration of Abies religiosa.

Authors:  Andrés Argüelles-Moyao; Roberto Garibay-Orijel
Journal:  Mycorrhiza       Date:  2018-06-11       Impact factor: 3.387

6.  Contrasting Patterns of Functional Diversity in Coffee Root Fungal Communities Associated with Organic and Conventionally Managed Fields.

Authors:  Elizabeth C Sternhagen; Katie L Black; Eliza D L Hartmann; W Gaya Shivega; Peter G Johnson; Riley D McGlynn; Logan C Schmaltz; Rebecca J Asheim Keller; Stefanie N Vink; Laura Aldrich-Wolfe
Journal:  Appl Environ Microbiol       Date:  2020-05-19       Impact factor: 4.792

Review 7.  Embracing the unknown: disentangling the complexities of the soil microbiome.

Authors:  Noah Fierer
Journal:  Nat Rev Microbiol       Date:  2017-08-21       Impact factor: 60.633

8.  Microbes and macro-invertebrates show parallel β-diversity but contrasting α-diversity patterns in a marine natural experiment.

Authors:  Giovanni Rapacciuolo; J Michael Beman; Lauren M Schiebelhut; Michael N Dawson
Journal:  Proc Biol Sci       Date:  2019-10-09       Impact factor: 5.349

9.  Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem.

Authors:  Alessandro Saitta; Sten Anslan; Mohammad Bahram; Luca Brocca; Leho Tedersoo
Journal:  Mycorrhiza       Date:  2017-11-06       Impact factor: 3.387

10.  Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits.

Authors:  Jonathan W Leff; Richard D Bardgett; Anna Wilkinson; Benjamin G Jackson; William J Pritchard; Jonathan R De Long; Simon Oakley; Kelly E Mason; Nicholas J Ostle; David Johnson; Elizabeth M Baggs; Noah Fierer
Journal:  ISME J       Date:  2018-03-09       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.