Literature DB >> 26169791

Automatic identification of fungi under complex microscopic fecal images.

Lin Liu, Yang Yuan, Jing Zhang, Haoting Lei, Qiang Wang, Juanxiu Liu, Xiaohui Du, Guangming Ni, Yong Liu.   

Abstract

Automatic identification of fungi in microscopic fecal images provides important information for evaluating digestive diseases. To date, disease diagnosis is primarily performed by manual techniques. However, the accuracy of this approach depends on the operator's expertise and subjective factors. The proposed system automatically identifies fungi in microscopic fecal images that contain other cells and impurities under complex environments. We segment images twice to obtain the correct area of interest, and select ten features, including the circle number, concavity point, and other basic features, to filter fungi. An artificial neural network (ANN) system is used to identify the fungi. The first stage (ANN-1) processes features from five images in differing focal lengths; the second stage (ANN-2) identifies the fungi using the ANN-1 output values. Images in differing focal lengths can be used to improve the identification result. The system output accurately detects the image, whether or not it has fungi. If the image does have fungi, the system output counts the number of different fungi types.

Mesh:

Year:  2015        PMID: 26169791     DOI: 10.1117/1.JBO.20.7.076004

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  4 in total

1.  Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy.

Authors:  Haozhong Ma; Jinshan Yang; Xiaolu Chen; Xinyu Jiang; Yimin Su; Shanlei Qiao; Guowei Zhong
Journal:  J Microbiol       Date:  2021-03-29       Impact factor: 3.422

Review 2.  Machine Learning and Deep Learning Based Computational Approaches in Automatic Microorganisms Image Recognition: Methodologies, Challenges, and Developments.

Authors:  Priya Rani; Shallu Kotwal; Jatinder Manhas; Vinod Sharma; Sparsh Sharma
Journal:  Arch Comput Methods Eng       Date:  2021-08-31       Impact factor: 8.171

3.  Automatic classification of cells in microscopic fecal images using convolutional neural networks.

Authors:  Xiaohui Du; Lin Liu; Xiangzhou Wang; Guangming Ni; Jing Zhang; Ruqian Hao; Juanxiu Liu; Yong Liu
Journal:  Biosci Rep       Date:  2019-04-05       Impact factor: 3.840

Review 4.  Biosensors and Diagnostics for Fungal Detection.

Authors:  Khalil K Hussain; Dhara Malavia; Elizabeth M Johnson; Jennifer Littlechild; C Peter Winlove; Frank Vollmer; Neil A R Gow
Journal:  J Fungi (Basel)       Date:  2020-12-08
  4 in total

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