Literature DB >> 26169020

The complete mitochondrial genome of threatened chocolate mahseer (Neolissochilus hexagonolepis) and its phylogeny.

Prabhati Kumari Sahoo1, Chirag Goel1, Rohit Kumar1, Nisha Dhama1, Shahnawaz Ali1, Dandadhar Sarma2, Prasanta Nanda3, Ashoktaru Barat4.   

Abstract

The chocolate mahseer (Neolissochilus hexagonolepis) is an important food and game fish of North Eastern India. To study the phylogenetic status we sequenced the complete mitochondrial genome of N. hexagonolepis. The mitogenome is 16,563 bp in length and composed of 13 protein coding genes, 22 tRNAs, 2 rRNAs and one putative control region. The overall base composition was A 31.8%, T 25.0%, G 15.8%, C 27.4% and A+T content 56.9%, G+C content 43.1%. The phylogenetic analysis using the complete mitochondrial genome revealed that the chocolate mahseer belonged to same clade of mahseer group of fishes but different from genera Barbus and Acrossocheilus. The present study will be helpful for the evolution and conservation genetic studies of N. hexagonolepis.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Complete mitochondrial genome; Mahseer group fishes; Neolissochilus hexagonolepis; Phylogenetic status

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Year:  2015        PMID: 26169020     DOI: 10.1016/j.gene.2015.07.024

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  3 in total

1.  Complete mitochondrial genome of threatened mahseer Tor tor (Hamilton 1822) and its phylogenetic relationship within Cyprinidae family.

Authors:  A Pavan-Kumar; Sudhanshu Raman; Prakash G Koringa; Namrata Patel; Tejas Shah; Rajeev K Singh; Gopal Krishna; C G Joshi; P Gireesh-Babu; Aparna Chaudhari
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

2.  Genetic diversity and population structure of the threatened chocolate mahseer (Neolissochilus hexagonolepis McClelland 1839) based on SSR markers: implications for conservation management in Northeast India.

Authors:  Lata Sharma; Shahnawaz Ali; C Siva; Rohit Kumar; Ashoktaru Barat; Prabhati K Sahoo; Veena Pande
Journal:  Mol Biol Rep       Date:  2019-07-19       Impact factor: 2.316

3.  The first complete mitochondrial genome sequence of Nanorana parkeri and Nanorana ventripunctata (Amphibia: Anura: Dicroglossidae), with related phylogenetic analyses.

Authors:  Lichun Jiang; Zhangqiang You; Peng Yu; Qiping Ruan; Wei Chen
Journal:  Ecol Evol       Date:  2018-06-11       Impact factor: 2.912

  3 in total

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