Literature DB >> 26167517

Dictyostelium Cultivation, Transfection, Microscopy and Fractionation.

Jennifer Hirst1, Robert R Kay2, David Traynor2.   

Abstract

The real time visualisation of fluorescently tagged proteins in live cells using ever more sophisticated microscopes has greatly increased our understanding of the dynamics of key proteins during fundamental physiological processes such as cell locomotion, chemotaxis, cell division and membrane trafficking. In addition the fractionation of cells and isolation of organelles or known compartments can often verify any subcellular localisation and the use of tagged proteins as bait for the immunoprecipitation of material from cell fractions can identify specific binding partners and multiprotein complexes thereby helping assign a function to the tagged protein. We have successfully applied these techniques to the Dictyostelium discoideum protein TSPOON that is part of an ancient heterohexamer membrane trafficking complex (Hirst et al., 2013). TSPOON is the product of the tstD gene in Dictyostelium and is not required for growth or the developmental cycle in this organism. Dictyostelium amoebae will exist in a vegetative phase where growth is sustained by the phagocytosis of bacteria. When this food source is spent they enter a developmental phase where the amoebae aggregate, via chemotaxis to extracellular waves of cAMP, into multicellular structures that subsequently form a fruiting body containing viable spores (Muller-Taubenberger et al., 2013). In the laboratory this cycle takes less than 24 h to complete and as a further aid to manipulation the requirement for a bacterial food source has been circumvented by the derivatisation of the wild type and isolation of axenic strains that can also grow in a nutrient rich broth. Axenic strains like Ax2 are the mainstay of laboratory research using Dictyostelium (Muller-Taubenberger et al., 2013). A description of Dictyostelium cell cultivation, the generation of cell lines that overexpress TSPOON-GFP and TSPOON null cells, and subsequent analysis (Muller-Taubenberger and Ishikawa-Ankerhold, 2013) is detailed below.

Entities:  

Year:  2015        PMID: 26167517      PMCID: PMC4497802          DOI: 10.21769/bioprotoc.1485

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  10 in total

1.  Variables controlling the expression level of exogenous genes in Dictyostelium.

Authors:  K M Pang; M A Lynes; D A Knecht
Journal:  Plasmid       Date:  1999-05       Impact factor: 3.466

2.  Optimized fixation and immunofluorescence staining methods for Dictyostelium cells.

Authors:  Monica Hagedorn; Eva M Neuhaus; Thierry Soldati
Journal:  Methods Mol Biol       Date:  2006

3.  Application of fluorescent protein tags as reporters in live-cell imaging studies.

Authors:  Annette Müller-Taubenberger
Journal:  Methods Mol Biol       Date:  2006

4.  Fluorescent reporters and methods to analyze fluorescent signals.

Authors:  Annette Müller-Taubenberger; Hellen C Ishikawa-Ankerhold
Journal:  Methods Mol Biol       Date:  2013

5.  A rapid and efficient method to generate multiple gene disruptions in Dictyostelium discoideum using a single selectable marker and the Cre-loxP system.

Authors:  Jan Faix; Lisa Kreppel; Gad Shaulsky; Michael Schleicher; Alan R Kimmel
Journal:  Nucleic Acids Res       Date:  2004-10-26       Impact factor: 16.971

6.  Generation of multiple knockout mutants using the Cre-loxP system.

Authors:  Alan R Kimmel; Jan Faix
Journal:  Methods Mol Biol       Date:  2006

Review 7.  Simple system--substantial share: the use of Dictyostelium in cell biology and molecular medicine.

Authors:  Annette Müller-Taubenberger; Arjan Kortholt; Ludwig Eichinger
Journal:  Eur J Cell Biol       Date:  2012-11-27       Impact factor: 4.492

8.  Widespread duplications in the genomes of laboratory stocks of Dictyostelium discoideum.

Authors:  Gareth Bloomfield; Yoshimasa Tanaka; Jason Skelton; Alasdair Ivens; Robert R Kay
Journal:  Genome Biol       Date:  2008-04-22       Impact factor: 13.583

9.  Strong increase in the tyrosine phosphorylation of actin upon inhibition of oxidative phosphorylation: correlation with reversible rearrangements in the actin skeleton of Dictyostelium cells.

Authors:  A Jungbluth; V von Arnim; E Biegelmann; B Humbel; A Schweiger; G Gerisch
Journal:  J Cell Sci       Date:  1994-01       Impact factor: 5.285

10.  Characterization of TSET, an ancient and widespread membrane trafficking complex.

Authors:  Jennifer Hirst; Alexander Schlacht; John P Norcott; David Traynor; Gareth Bloomfield; Robin Antrobus; Robert R Kay; Joel B Dacks; Margaret S Robinson
Journal:  Elife       Date:  2014-05-27       Impact factor: 8.140

  10 in total
  2 in total

1.  A polycystin-type transient receptor potential (Trp) channel that is activated by ATP.

Authors:  David Traynor; Robert R Kay
Journal:  Biol Open       Date:  2017-02-15       Impact factor: 2.422

2.  Characterization of TSET, an ancient and widespread membrane trafficking complex.

Authors:  Jennifer Hirst; Alexander Schlacht; John P Norcott; David Traynor; Gareth Bloomfield; Robin Antrobus; Robert R Kay; Joel B Dacks; Margaret S Robinson
Journal:  Elife       Date:  2014-05-27       Impact factor: 8.140

  2 in total

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