Literature DB >> 26162051

The complete chloroplast genome sequence of Panax quinquefolius (L.).

Kyunghee Kim1,2, Sang-Choon Lee1, Junki Lee1, Nam-Hoon Kim1, Woojong Jang1, Tae-Jin Yang1.   

Abstract

The complete chloroplast genome sequence of Panax quinquefolius, an important medicinal herb, was generated by de novo assembly with low-coverage whole-genome sequence data and manual correction. A circular 156 088-bp chloroplast genome showed typical chloroplast genome structure comprising a large single copy region of 86 095 bp, a small single copy region of 17 993 bp, and a pair of inverted repeats of 26 000 bp. The chloroplast genome had 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis with the chloroplast genome revealed that P. quinquefolius is much closer to P. ginseng than P. notoginseng.

Entities:  

Keywords:  American ginseng; Panax quinquefolius; chloroplast; genome sequence

Mesh:

Year:  2015        PMID: 26162051     DOI: 10.3109/19401736.2015.1063121

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Evolution of the Araliaceae family inferred from complete chloroplast genomes and 45S nrDNAs of 10 Panax-related species.

Authors:  Kyunghee Kim; Van Binh Nguyen; Jingzhou Dong; Ying Wang; Jee Young Park; Sang-Choon Lee; Tae-Jin Yang
Journal:  Sci Rep       Date:  2017-07-07       Impact factor: 4.379

Review 2.  Dynamic evolution of Panax species.

Authors:  Hyeonah Shim; Nomar Espinosa Waminal; Hyun Hee Kim; Tae-Jin Yang
Journal:  Genes Genomics       Date:  2021-02-20       Impact factor: 1.839

3.  Genome and evolution of the shade-requiring medicinal herb Panax ginseng.

Authors:  Nam-Hoon Kim; Murukarthick Jayakodi; Sang-Choon Lee; Beom-Soon Choi; Woojong Jang; Junki Lee; Hyun Hee Kim; Nomar E Waminal; Meiyappan Lakshmanan; Binh van Nguyen; Yun Sun Lee; Hyun-Seung Park; Hyun Jo Koo; Jee Young Park; Sampath Perumal; Ho Jun Joh; Hana Lee; Jinkyung Kim; In Seo Kim; Kyunghee Kim; Lokanand Koduru; Kyo Bin Kang; Sang Hyun Sung; Yeisoo Yu; Daniel S Park; Doil Choi; Eunyoung Seo; Seungill Kim; Young-Chang Kim; Dong Yun Hyun; Youn-Il Park; Changsoo Kim; Tae-Ho Lee; Hyun Uk Kim; Moon Soo Soh; Yi Lee; Jun Gyo In; Heui-Soo Kim; Yong-Min Kim; Deok-Chun Yang; Rod A Wing; Dong-Yup Lee; Andrew H Paterson; Tae-Jin Yang
Journal:  Plant Biotechnol J       Date:  2018-05-25       Impact factor: 9.803

  3 in total

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