Literature DB >> 26158034

Accurate and reliable segmentation of the optic disc in digital fundus images.

Andrea Giachetti1, Lucia Ballerini2, Emanuele Trucco2.   

Abstract

We describe a complete pipeline for the detection and accurate automatic segmentation of the optic disc in digital fundus images. This procedure provides separation of vascular information and accurate inpainting of vessel-removed images, symmetry-based optic disc localization, and fitting of incrementally complex contour models at increasing resolutions using information related to inpainted images and vessel masks. Validation experiments, performed on a large dataset of images of healthy and pathological eyes, annotated by experts and partially graded with a quality label, demonstrate the good performances of the proposed approach. The method is able to detect the optic disc and trace its contours better than the other systems presented in the literature and tested on the same data. The average error in the obtained contour masks is reasonably close to the interoperator errors and suitable for practical applications. The optic disc segmentation pipeline is currently integrated in a complete software suite for the semiautomatic quantification of retinal vessel properties from fundus camera images (VAMPIRE).

Keywords:  active contours; inpainting; multiresolution; optic disc; radial symmetry; validation

Year:  2014        PMID: 26158034      PMCID: PMC4478982          DOI: 10.1117/1.JMI.1.2.024001

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  24 in total

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Authors:  C Sinthanayothin; J F Boyce; H L Cook; T H Williamson
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2.  Fast and robust optic disc detection using pyramidal decomposition and Hausdorff-based template matching.

Authors:  M Lalonde; M Beaulieu; L Gagnon
Journal:  IEEE Trans Med Imaging       Date:  2001-11       Impact factor: 10.048

3.  Locating the optic nerve in a retinal image using the fuzzy convergence of the blood vessels.

Authors:  Adam Hoover; Michael Goldbaum
Journal:  IEEE Trans Med Imaging       Date:  2003-08       Impact factor: 10.048

4.  Optic nerve head segmentation.

Authors:  James Lowell; Andrew Hunter; David Steel; Ansu Basu; Robert Ryder; Eric Fletcher; Lee Kennedy
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

5.  Automated optic disk boundary detection by modified active contour model.

Authors:  Juan Xu; Opas Chutatape; Paul Chew
Journal:  IEEE Trans Biomed Eng       Date:  2007-03       Impact factor: 4.538

6.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

Review 7.  Detection of the optic nerve head in fundus images of the retina with Gabor filters and phase portrait analysis.

Authors:  Rangaraj M Rangayyan; Xiaolu Zhu; Fábio J Ayres; Anna L Ells
Journal:  J Digit Imaging       Date:  2010-01-12       Impact factor: 4.056

8.  Fast detection of the optic disc and fovea in color fundus photographs.

Authors:  Meindert Niemeijer; Michael D Abràmoff; Bram van Ginneken
Journal:  Med Image Anal       Date:  2009-09-04       Impact factor: 8.545

9.  Retinal microvascular abnormalities and incident stroke: the Atherosclerosis Risk in Communities Study.

Authors:  T Y Wong; R Klein; D J Couper; L S Cooper; E Shahar; L D Hubbard; M R Wofford; A R Sharrett
Journal:  Lancet       Date:  2001-10-06       Impact factor: 79.321

10.  Optic disc margin anatomy in patients with glaucoma and normal controls with spectral domain optical coherence tomography.

Authors:  Alexandre S C Reis; Glen P Sharpe; Hongli Yang; Marcelo T Nicolela; Claude F Burgoyne; Balwantray C Chauhan
Journal:  Ophthalmology       Date:  2012-01-04       Impact factor: 12.079

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  10 in total

1.  Quadratic divergence regularized SVM for optic disc segmentation.

Authors:  Jun Cheng; Dacheng Tao; Damon Wing Kee Wong; Jiang Liu
Journal:  Biomed Opt Express       Date:  2017-04-26       Impact factor: 3.732

2.  Modulation of retinal image vasculature analysis to extend utility and provide secondary value from optical coherence tomography imaging.

Authors:  James R Cameron; Lucia Ballerini; Clare Langan; Claire Warren; Nicholas Denholm; Katie Smart; Thomas J MacGillivray
Journal:  J Med Imaging (Bellingham)       Date:  2016-05-02

3.  Optic Disc and Cup Image Segmentation Utilizing Contour-Based Transformation and Sequence Labeling Networks.

Authors:  Zhe Xie; Tonghui Ling; Yuanyuan Yang; Rong Shu; Brent J Liu
Journal:  J Med Syst       Date:  2020-03-20       Impact factor: 4.460

4.  Automatic optic disk detection in retinal images using hybrid vessel phase portrait analysis.

Authors:  Nittaya Muangnak; Pakinee Aimmanee; Stanislav Makhanov
Journal:  Med Biol Eng Comput       Date:  2017-08-24       Impact factor: 2.602

5.  Concordance between SIVA, IVAN, and VAMPIRE Software Tools for Semi-Automated Analysis of Retinal Vessel Caliber.

Authors:  Thibaud Mautuit; Pierre Cunnac; Carol Y Cheung; Tien Y Wong; Stephen Hogg; Emanuele Trucco; Vincent Daien; Thomas J MacGillivray; José Labarère; Christophe Chiquet
Journal:  Diagnostics (Basel)       Date:  2022-05-25

6.  Two-stage framework for optic disc localization and glaucoma classification in retinal fundus images using deep learning.

Authors:  Muhammad Naseer Bajwa; Muhammad Imran Malik; Shoaib Ahmed Siddiqui; Andreas Dengel; Faisal Shafait; Wolfgang Neumeier; Sheraz Ahmed
Journal:  BMC Med Inform Decis Mak       Date:  2019-07-17       Impact factor: 2.796

7.  Which Color Channel Is Better for Diagnosing Retinal Diseases Automatically in Color Fundus Photographs?

Authors:  Sangeeta Biswas; Md Iqbal Aziz Khan; Md Tanvir Hossain; Angkan Biswas; Takayoshi Nakai; Johan Rohdin
Journal:  Life (Basel)       Date:  2022-06-28

8.  Retinal vascular measures from diabetes retinal screening photographs and risk of incident dementia in type 2 diabetes: A GoDARTS study.

Authors:  Alexander S F Doney; Aditya Nar; Yu Huang; Emanuele Trucco; Tom MacGillivray; Peter Connelly; Graham P Leese; Gareth J McKay
Journal:  Front Digit Health       Date:  2022-08-31

9.  Contrast based circular approximation for accurate and robust optic disc segmentation in retinal images.

Authors:  Jose Sigut; Omar Nunez; Francisco Fumero; Marta Gonzalez; Rafael Arnay
Journal:  PeerJ       Date:  2017-09-07       Impact factor: 2.984

10.  Towards Standardization of Quantitative Retinal Vascular Parameters: Comparison of SIVA and VAMPIRE Measurements in the Lothian Birth Cohort 1936.

Authors:  Sarah McGrory; Adele M Taylor; Enrico Pellegrini; Lucia Ballerini; Mirna Kirin; Fergus N Doubal; Joanna M Wardlaw; Alex S F Doney; Baljean Dhillon; John M Starr; Emanuele Trucco; Ian J Deary; Thomas J MacGillivray
Journal:  Transl Vis Sci Technol       Date:  2018-03-23       Impact factor: 3.283

  10 in total

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