Literature DB >> 26154788

A Variegated Squirrel Bornavirus Associated with Fatal Human Encephalitis.

Bernd Hoffmann1, Dennis Tappe, Dirk Höper, Christiane Herden, Annemarie Boldt, Christian Mawrin, Olaf Niederstraßer, Tobias Müller, Maria Jenckel, Elisabeth van der Grinten, Christian Lutter, Björn Abendroth, Jens P Teifke, Daniel Cadar, Jonas Schmidt-Chanasit, Rainer G Ulrich, Martin Beer.   

Abstract

Between 2011 and 2013, three breeders of variegated squirrels (Sciurus variegatoides) had encephalitis with similar clinical signs and died 2 to 4 months after onset of the clinical symptoms. With the use of a metagenomic approach that incorporated next-generation sequencing and real-time reverse-transcriptase quantitative polymerase chain reaction (RT-qPCR), the presence of a previously unknown bornavirus was detected in a contact squirrel and in brain samples from the three patients. Phylogenetic analyses showed that this virus, tentatively named variegated squirrel 1 bornavirus (VSBV-1), forms a lineage separate from that of the known bornavirus species. (Funded by the Federal Ministry of Food and Agriculture [Germany] and others.).

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Year:  2015        PMID: 26154788     DOI: 10.1056/NEJMoa1415627

Source DB:  PubMed          Journal:  N Engl J Med        ISSN: 0028-4793            Impact factor:   91.245


  88 in total

1. 

Authors: 
Journal:  Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz       Date:  2019-04       Impact factor: 1.513

2.  Impact of Contaminating DNA in Whole-Genome Amplification Kits Used for Metagenomic Shotgun Sequencing for Infection Diagnosis.

Authors:  Matthew Thoendel; Patricio Jeraldo; Kerryl E Greenwood-Quaintance; Janet Yao; Nicholas Chia; Arlen D Hanssen; Matthew P Abdel; Robin Patel
Journal:  J Clin Microbiol       Date:  2017-03-29       Impact factor: 5.948

3.  Evaluation of the CosmosID Bioinformatics Platform for Prosthetic Joint-Associated Sonicate Fluid Shotgun Metagenomic Data Analysis.

Authors:  Qun Yan; Yu Mi Wi; Matthew J Thoendel; Yash S Raval; Kerryl E Greenwood-Quaintance; Matthew P Abdel; Patricio R Jeraldo; Nicholas Chia; Robin Patel
Journal:  J Clin Microbiol       Date:  2019-01-30       Impact factor: 5.948

4.  Direct Detection and Identification of Prosthetic Joint Infection Pathogens in Synovial Fluid by Metagenomic Shotgun Sequencing.

Authors:  Morgan I Ivy; Matthew J Thoendel; Patricio R Jeraldo; Kerryl E Greenwood-Quaintance; Arlen D Hanssen; Matthew P Abdel; Nicholas Chia; Janet Z Yao; Aaron J Tande; Jayawant N Mandrekar; Robin Patel
Journal:  J Clin Microbiol       Date:  2018-08-27       Impact factor: 5.948

Review 5.  Chronic Meningitis.

Authors:  Kiran T Thakur; Michael R Wilson
Journal:  Continuum (Minneap Minn)       Date:  2018-10

6.  Development and Optimization of Metagenomic Next-Generation Sequencing Methods for Cerebrospinal Fluid Diagnostics.

Authors:  Patricia J Simner; Heather B Miller; Florian P Breitwieser; Gabriel Pinilla Monsalve; Carlos A Pardo; Steven L Salzberg; Cynthia L Sears; David L Thomas; Charles G Eberhart; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2018-08-27       Impact factor: 5.948

7.  Detection of Viruses in Clinical Samples by Use of Metagenomic Sequencing and Targeted Sequence Capture.

Authors:  Kristine M Wylie; Todd N Wylie; Richard Buller; Brandi Herter; Maria T Cannella; Gregory A Storch
Journal:  J Clin Microbiol       Date:  2018-11-27       Impact factor: 5.948

Review 8.  From the Pipeline to the Bedside: Advances and Challenges in Clinical Metagenomics.

Authors:  Augusto Dulanto Chiang; John P Dekker
Journal:  J Infect Dis       Date:  2020-03-28       Impact factor: 5.226

9.  Comparison of microbial DNA enrichment tools for metagenomic whole genome sequencing.

Authors:  Matthew Thoendel; Patricio R Jeraldo; Kerryl E Greenwood-Quaintance; Janet Z Yao; Nicholas Chia; Arlen D Hanssen; Matthew P Abdel; Robin Patel
Journal:  J Microbiol Methods       Date:  2016-05-26       Impact factor: 2.363

Review 10.  [Rabies and Bornavirus encephalitis : Fatal emerging viral encephalitis-a potential problem for organ recipients].

Authors:  E Schmutzhard; B Pfausler
Journal:  Nervenarzt       Date:  2018-12       Impact factor: 1.214

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