Literature DB >> 26151092

Assessment of Genetic Markers for Tracking the Sources of Human Wastewater Associated Escherichia coli in Environmental Waters.

Ahmed Warish1,2, Cheryl Triplett3, Ryota Gomi4, Pradip Gyawali1,5, Leonie Hodgers1, Simon Toze1,5.   

Abstract

In this study, we have evaluated the performance characteristics (host-specificity and -sensitivity) of four human wastewater-associated Escherichia coli (E. coli) genetic markers (H8, H12, H14, and H24) in 10 target (human) and nontarget (cat, cattle, deer, dog, emu, goat, horse, kangaroo, and possum) host groups in Southeast Queensland, Australia. The overall host-sensitivity values of the tested markers in human wastewater samples were 1.0 (all human wastewater samples contained the E. coli genetic markers). The overall host-specificity values of these markers to differentiate between human and animal host groups were 0.94, 0.85, 0.72, and 0.57 for H8, H12, H24, and H14, respectively. Based on the higher host-specificity values, H8 and H12 markers were chosen for a validation environmental study. The prevalence of the H8 and H12 markers was determined among human wastewater E. coli isolates collected from a wastewater treatment plant (WWTP). Among the 97 isolates tested, 44 (45%) and 14 (14%) were positive for the H8 and H12 markers, respectively. A total of 307 E. coli isolates were tested from environmental water samples collected in Brisbane, of which 7% and 20% were also positive for the H8 and H12 markers, respectively. Based on our results, we recommend that these markers could be useful when it is important to identify the source(s) of E. coli (whether they originated from human wastewater or not) in environmental waters.

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Year:  2015        PMID: 26151092     DOI: 10.1021/acs.est.5b02163

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  4 in total

1.  Cross-Comparison of Human Wastewater-Associated Molecular Markers in Relation to Fecal Indicator Bacteria and Enteric Viruses in Recreational Beach Waters.

Authors:  B Hughes; D J Beale; P G Dennis; S Cook; W Ahmed
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

2.  Partial sequence conservation of SARS-CoV-2 NSP-2, NSP-12, and Spike in stool samples from Abadan, Iran.

Authors:  Milad Zandi; Saber Soltani; Alireza Tabibzadeh; Sepideh Nasimzadeh; Emad Behboudi; Armin Zakeri; Yousef Erfani; Shokrollah Salmanzadeh; Samaneh Abbasi
Journal:  Biotechnol Appl Biochem       Date:  2022-04-09       Impact factor: 2.724

3.  Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems.

Authors:  Yue O O Hu; Nelson Ndegwa; Johannes Alneberg; Sebastian Johansson; Jürg Brendan Logue; Mikael Huss; Max Käller; Joakim Lundeberg; Jens Fagerberg; Anders F Andersson
Journal:  Sci Rep       Date:  2018-08-09       Impact factor: 4.379

4.  Utility of Stool PCR for the Diagnosis of COVID-19: Comparison of Two Commercial Platforms.

Authors:  Wendy A Szymczak; D Yitzchak Goldstein; Erika P Orner; Roger A Fecher; Raquel T Yokoda; Karin A Skalina; Momka Narlieva; Inessa Gendlina; Amy S Fox
Journal:  J Clin Microbiol       Date:  2020-08-24       Impact factor: 5.948

  4 in total

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