Literature DB >> 26146078

Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic.

Vincent J Lynch1, Oscar C Bedoya-Reina2, Aakrosh Ratan2, Michael Sulak3, Daniela I Drautz-Moses2, George H Perry4, Webb Miller5, Stephan C Schuster2.   

Abstract

Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asian elephants and two woolly mammoths, and we identified and functionally annotated genetic changes unique to woolly mammoths. We found that genes with mammoth-specific amino acid changes are enriched in functions related to circadian biology, skin and hair development and physiology, lipid metabolism, adipose development and physiology, and temperature sensation. Finally, we resurrected and functionally tested the mammoth and ancestral elephant TRPV3 gene, which encodes a temperature-sensitive transient receptor potential (thermoTRP) channel involved in thermal sensation and hair growth, and we show that a single mammoth-specific amino acid substitution in an otherwise highly conserved region of the TRPV3 channel strongly affects its temperature sensitivity.
Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26146078     DOI: 10.1016/j.celrep.2015.06.027

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  31 in total

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2.  Million-year-old DNA provides a glimpse of mammoth evolution.

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Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

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Authors:  Pablo Librado; Clio Der Sarkissian; Luca Ermini; Mikkel Schubert; Hákon Jónsson; Anders Albrechtsen; Matteo Fumagalli; Melinda A Yang; Cristina Gamba; Andaine Seguin-Orlando; Cecilie D Mortensen; Bent Petersen; Cindi A Hoover; Belen Lorente-Galdos; Artem Nedoluzhko; Eugenia Boulygina; Svetlana Tsygankova; Markus Neuditschko; Vidhya Jagannathan; Catherine Thèves; Ahmed H Alfarhan; Saleh A Alquraishi; Khaled A S Al-Rasheid; Thomas Sicheritz-Ponten; Ruslan Popov; Semyon Grigoriev; Anatoly N Alekseev; Edward M Rubin; Molly McCue; Stefan Rieder; Tosso Leeb; Alexei Tikhonov; Eric Crubézy; Montgomery Slatkin; Tomas Marques-Bonet; Rasmus Nielsen; Eske Willerslev; Juha Kantanen; Egor Prokhortchouk; Ludovic Orlando
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10.  A comprehensive genomic history of extinct and living elephants.

Authors:  Eleftheria Palkopoulou; Mark Lipson; Swapan Mallick; Svend Nielsen; Nadin Rohland; Sina Baleka; Emil Karpinski; Atma M Ivancevic; Thu-Hien To; R Daniel Kortschak; Joy M Raison; Zhipeng Qu; Tat-Jun Chin; Kurt W Alt; Stefan Claesson; Love Dalén; Ross D E MacPhee; Harald Meller; Alfred L Roca; Oliver A Ryder; David Heiman; Sarah Young; Matthew Breen; Christina Williams; Bronwen L Aken; Magali Ruffier; Elinor Karlsson; Jeremy Johnson; Federica Di Palma; Jessica Alfoldi; David L Adelson; Thomas Mailund; Kasper Munch; Kerstin Lindblad-Toh; Michael Hofreiter; Hendrik Poinar; David Reich
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-26       Impact factor: 11.205

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