Literature DB >> 26144842

New insights into the kinetic target-guided synthesis of protein ligands.

Emilia Oueis1, Cyrille Sabot, Pierre-Yves Renard.   

Abstract

The kinetic target-guided synthesis (KTGS) strategy is an unconventional discovery approach that takes advantage of the presence of the biological target itself in order to irreversibly assemble the best inhibitors from an array of building blocks. This strategy has grown over the last two decades notably after the introduction of the in situ click chemistry concept by Sharpless and colleagues in the early 2000s based on the use of the Huisgen cycloaddition between terminal alkynes and azides. KTGS is a captivating area of research offering an unprecedented and powerful strategy to probe the macromolecular complexity and dynamics of biological targets. After a brief introduction listing all chemical ligation reactions reported to date in KTGS, this review focuses on the last five years' progress to expand the repertoire of the click or "click-like" tool box targeting proteins, as well as to overcome limitations arising in particular from false negatives, i.e. potent ligands that are not formed, or formed in undetectable trace amounts. Furthermore, we wish to analyze the new twists and novelties described in some of these applications in order to better understand the conditions that govern this strategy and the extent to which it can be developed and generalized for a more efficient process.

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Year:  2015        PMID: 26144842     DOI: 10.1039/c5cc04183j

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  11 in total

1.  SuFEx-enabled, agnostic discovery of covalent inhibitors of human neutrophil elastase.

Authors:  Qinheng Zheng; Jordan L Woehl; Seiya Kitamura; Diogo Santos-Martins; Christopher J Smedley; Gencheng Li; Stefano Forli; John E Moses; Dennis W Wolan; K Barry Sharpless
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-04       Impact factor: 11.205

2.  Cell-Based Kinetic Target-Guided Synthesis of an Enzyme Inhibitor.

Authors:  Henrik Antti; Magnus Sellstedt
Journal:  ACS Med Chem Lett       Date:  2018-03-08       Impact factor: 4.345

Review 3.  Tailored therapeutics based on 1,2,3-1H-triazoles: a mini review.

Authors:  Parteek Prasher; Mousmee Sharma
Journal:  Medchemcomm       Date:  2019-05-14       Impact factor: 3.597

4.  A fluorescent target-guided Paal-Knorr reaction.

Authors:  Sachin B Wagh; Vladimir Maslivetc; James J La Clair; Alexander Kornienko
Journal:  RSC Adv       Date:  2020-10-07       Impact factor: 4.036

5.  Protein-Templated Formation of an Inhibitor of the Blood Coagulation Factor Xa through a Background-Free Amidation Reaction.

Authors:  Mike Jaegle; Torsten Steinmetzer; Jörg Rademann
Journal:  Angew Chem Int Ed Engl       Date:  2017-02-15       Impact factor: 15.336

6.  Increasing Polarity in Tacrine and Huprine Derivatives: Potent Anticholinesterase Agents for the Treatment of Myasthenia Gravis.

Authors:  Carles Galdeano; Nicolas Coquelle; Monika Cieslikiewicz-Bouet; Manuela Bartolini; Belén Pérez; M Victòria Clos; Israel Silman; Ludovic Jean; Jacques-Philippe Colletier; Pierre-Yves Renard; Diego Muñoz-Torrero
Journal:  Molecules       Date:  2018-03-11       Impact factor: 4.411

Review 7.  Protein-Templated Fragment Ligations-From Molecular Recognition to Drug Discovery.

Authors:  Mike Jaegle; Ee Lin Wong; Carolin Tauber; Eric Nawrotzky; Christoph Arkona; Jörg Rademann
Journal:  Angew Chem Int Ed Engl       Date:  2017-05-31       Impact factor: 15.336

8.  Proteintemplat-gesteuerte Fragmentligationen - von der molekularen Erkennung zur Wirkstofffindung.

Authors:  Mike Jaegle; Ee Lin Wong; Carolin Tauber; Eric Nawrotzky; Christoph Arkona; Jörg Rademann
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2017-05-31

9.  Target-Directed Azide-Alkyne Cycloaddition for Assembling HIV-1 TAR RNA Binding Ligands.

Authors:  Rakesh Paul; Debasish Dutta; Raj Paul; Jyotirmayee Dash
Journal:  Angew Chem Int Ed Engl       Date:  2020-05-25       Impact factor: 15.336

10.  Protein-Templated Hit Identification through an Ugi Four-Component Reaction*.

Authors:  Federica Mancini; M Yagiz Unver; Walid A M Elgaher; Varsha R Jumde; Alaa Alhayek; Peer Lukat; Jennifer Herrmann; Martin D Witte; Matthias Köck; Wulf Blankenfeldt; Rolf Müller; Anna K H Hirsch
Journal:  Chemistry       Date:  2020-09-30       Impact factor: 5.236

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