Literature DB >> 26142323

Exome sequencing for molecular characterization of non-HFE hereditary hemochromatosis.

Colin P Farrell1, Charles J Parker1, John D Phillips2.   

Abstract

Diagnostic genetic testing for hereditary hemochromatosis is readily available for clinically relevant HFE variants (i.e., those that generate the C282Y, H63D and S65C HFE polymorphisms); however, genetic testing for other known causes of iron overload, including mutations affecting genes encoding hemojuvelin, transferrin receptor 2, HAMP, and ferroportin is not. As an alternative to conventional genetic testing we propose diagnostic use of whole exome sequencing for characterization of non-HFE hemochromatosis. To illustrate the effectiveness of whole exome sequencing as a diagnostic tool, we present the case of an 18-year-old female with a probable case of juvenile hemochromatosis, who was referred for specialty care after testing negative for commonly occurring HFE variants. Whole exome sequencing offered complete coverage of target genes and is a fast, cost effective diagnostic tool for characterization of non-HFE hemochromatosis.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Hemochromatosis; Hemojuvelin; Hepcidin; Iron overload; Transferrin receptor 2

Mesh:

Year:  2015        PMID: 26142323      PMCID: PMC4491409          DOI: 10.1016/j.bcmd.2015.04.002

Source DB:  PubMed          Journal:  Blood Cells Mol Dis        ISSN: 1079-9796            Impact factor:   3.039


  14 in total

1.  Hemochromatosis and hemojuvelin G320V homozygosity in a Hungarian woman.

Authors:  Judit Várkonyi; Sándor Lueff; Nikolette Szucs; Zoltán Pozsonyi; Attila Tóth; István Karádi; Antonello Pietrangelo
Journal:  Acta Haematol       Date:  2010-03-17       Impact factor: 2.195

2.  First FDA authorization for next-generation sequencer.

Authors:  Francis S Collins; Margaret A Hamburg
Journal:  N Engl J Med       Date:  2013-11-19       Impact factor: 91.245

Review 3.  Diagnostic evaluation of hereditary hemochromatosis (HFE and non-HFE).

Authors:  Edouard Bardou-Jacquet; Pierre Brissot
Journal:  Hematol Oncol Clin North Am       Date:  2014-06-02       Impact factor: 3.722

4.  Regulation of next generation sequencing.

Authors:  Gail H Javitt; Katherine Strong Carner
Journal:  J Law Med Ethics       Date:  2014       Impact factor: 1.718

5.  Exome sequencing in HFE C282Y homozygous men with extreme phenotypes identifies a GNPAT variant associated with severe iron overload.

Authors:  Christine E McLaren; Mary J Emond; V Nathan Subramaniam; Pradyumna D Phatak; James C Barton; Paul C Adams; Justin B Goh; Cameron J McDonald; Lawrie W Powell; Lyle C Gurrin; Katrina J Allen; Deborah A Nickerson; Tin Louie; Grant A Ramm; Gregory J Anderson; Gordon D McLaren
Journal:  Hepatology       Date:  2015-03-18       Impact factor: 17.425

6.  Six-transmembrane epithelial antigen of prostate 4 and neutrophil gelatinase-associated lipocalin expression in visceral adipose tissue is related to iron status and inflammation in human obesity.

Authors:  Victoria Catalán; Javier Gómez-Ambrosi; Amaia Rodríguez; Beatriz Ramírez; Fernando Rotellar; Victor Valentí; Camilo Silva; María J Gil; Javier Salvador; Gema Frühbeck
Journal:  Eur J Nutr       Date:  2012-11-22       Impact factor: 5.614

Review 7.  Solving the molecular diagnostic testing conundrum for Mendelian disorders in the era of next-generation sequencing: single-gene, gene panel, or exome/genome sequencing.

Authors:  Yuan Xue; Arunkanth Ankala; William R Wilcox; Madhuri R Hegde
Journal:  Genet Med       Date:  2014-09-18       Impact factor: 8.822

Review 8.  Molecular diagnostic and pathogenesis of hereditary hemochromatosis.

Authors:  Paulo C J L Santos; Jose E Krieger; Alexandre C Pereira
Journal:  Int J Mol Sci       Date:  2012-02-01       Impact factor: 6.208

9.  Spectrum of hemojuvelin gene mutations in 1q-linked juvenile hemochromatosis.

Authors:  Carmela Lanzara; Antonella Roetto; Filomena Daraio; Silvain Rivard; Romina Ficarella; Hervey Simard; Timothy M Cox; Mario Cazzola; Alberto Piperno; Anne-Paule Gimenez-Roqueplo; Paola Grammatico; Stefano Volinia; Paolo Gasparini; Clara Camaschella
Journal:  Blood       Date:  2004-02-24       Impact factor: 22.113

Review 10.  Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing.

Authors:  Riyue Bao; Lei Huang; Jorge Andrade; Wei Tan; Warren A Kibbe; Hongmei Jiang; Gang Feng
Journal:  Cancer Inform       Date:  2014-09-21
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  1 in total

Review 1.  Genotypic and phenotypic spectra of hemojuvelin mutations in primary hemochromatosis patients: a systematic review.

Authors:  Xiaomu Kong; Lingding Xie; Haiqing Zhu; Lulu Song; Xiaoyan Xing; Wenying Yang; Xiaoping Chen
Journal:  Orphanet J Rare Dis       Date:  2019-07-08       Impact factor: 4.123

  1 in total

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