Literature DB >> 26139286

ESKAPEing the labyrinth of antibacterial discovery.

Ruben Tommasi1, Dean G Brown2, Grant K Walkup3, John I Manchester4, Alita A Miller1.   

Abstract

Antimicrobial drug resistance is a growing threat to global public health. Multidrug resistance among the 'ESKAPE' organisms - encompassing Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa and Enterobacter spp. - is of particular concern because they are responsible for many serious infections in hospitals. Although some promising agents are in the pipeline, there is an urgent need for new antibiotic scaffolds. However, antibacterial researchers have struggled to identify new small molecules with meaningful cellular activity, especially those effective against multidrug-resistant Gram-negative pathogens. This difficulty ultimately stems from an incomplete understanding of efflux systems and compound permeation through bacterial membranes. This Opinion article describes findings from target-based and phenotypic screening efforts carried out at AstraZeneca over the past decade, discusses some of the subsequent chemistry challenges and concludes with a description of new approaches comprising a combination of computational modelling and advanced biological tools which may pave the way towards the discovery of new antibacterial agents.

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Year:  2015        PMID: 26139286     DOI: 10.1038/nrd4572

Source DB:  PubMed          Journal:  Nat Rev Drug Discov        ISSN: 1474-1776            Impact factor:   84.694


  59 in total

1.  Escaping free-energy minima.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

Review 2.  Bugs, drugs and chemical genomics.

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Journal:  Nat Chem Biol       Date:  2011-12-15       Impact factor: 15.040

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Authors:  Jean Armengaud
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Review 4.  A metabolic network approach for the identification and prioritization of antimicrobial drug targets.

Authors:  Arvind K Chavali; Kevin M D'Auria; Erik L Hewlett; Richard D Pearson; Jason A Papin
Journal:  Trends Microbiol       Date:  2012-01-31       Impact factor: 17.079

Review 5.  Bacterial cell shape.

Authors:  Matthew T Cabeen; Christine Jacobs-Wagner
Journal:  Nat Rev Microbiol       Date:  2005-08       Impact factor: 60.633

6.  Toward understanding the outer membrane uptake of small molecules by Pseudomonas aeruginosa.

Authors:  Elif Eren; Jamie Parkin; Ayodele Adelanwa; Belete Cheneke; Liviu Movileanu; Syma Khalid; Bert van den Berg
Journal:  J Biol Chem       Date:  2013-03-06       Impact factor: 5.157

7.  Identification of a cation transport pathway in Neisseria meningitidis PorB.

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Journal:  Proteins       Date:  2013-02-25

Review 8.  hERG potassium channels and cardiac arrhythmia.

Authors:  Michael C Sanguinetti; Martin Tristani-Firouzi
Journal:  Nature       Date:  2006-03-23       Impact factor: 49.962

9.  Substrate specificity within a family of outer membrane carboxylate channels.

Authors:  Elif Eren; Jagamya Vijayaraghavan; Jiaming Liu; Belete R Cheneke; Debra S Touw; Bryan W Lepore; Mridhu Indic; Liviu Movileanu; Bert van den Berg
Journal:  PLoS Biol       Date:  2012-01-17       Impact factor: 8.029

10.  Genes contributing to Staphylococcus aureus fitness in abscess- and infection-related ecologies.

Authors:  Michael D Valentino; Lucy Foulston; Ama Sadaka; Veronica N Kos; Regis A Villet; John Santa Maria; David W Lazinski; Andrew Camilli; Suzanne Walker; David C Hooper; Michael S Gilmore
Journal:  mBio       Date:  2014-09-02       Impact factor: 7.867

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  158 in total

Review 1.  Antibacterial drug discovery in the resistance era.

Authors:  Eric D Brown; Gerard D Wright
Journal:  Nature       Date:  2016-01-21       Impact factor: 49.962

2.  Coumarin-benzimidazole hybrids as a potent antimicrobial agent: synthesis and biological elevation.

Authors:  L Ravithej Singh; Srinivasa Rao Avula; Sneha Raj; Akanksha Srivastava; Gopala Reddy Palnati; C K M Tripathi; Mukesh Pasupuleti; Koneni V Sashidhara
Journal:  J Antibiot (Tokyo)       Date:  2017-06-21       Impact factor: 2.649

Review 3.  Antibiotics in the clinical pipeline at the end of 2015.

Authors:  Mark S Butler; Mark At Blaskovich; Matthew A Cooper
Journal:  J Antibiot (Tokyo)       Date:  2016-06-29       Impact factor: 2.649

4.  Simultaneous elucidation of antibiotic mechanism of action and potency with high-throughput Fourier-transform infrared (FTIR) spectroscopy and machine learning.

Authors:  Bernardo Ribeiro da Cunha; Luís P Fonseca; Cecília R C Calado
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-14       Impact factor: 4.813

5.  Coevolutionary phage training leads to greater bacterial suppression and delays the evolution of phage resistance.

Authors:  Joshua M Borin; Sarit Avrani; Jeffrey E Barrick; Katherine L Petrie; Justin R Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

6.  Modeling the Kinetics of the Permeation of Antibacterial Agents into Growing Bacteria and Its Interplay with Efflux.

Authors:  Wright W Nichols
Journal:  Antimicrob Agents Chemother       Date:  2017-09-22       Impact factor: 5.191

7.  Liquid crystalline bacterial outer membranes are critical for antibiotic susceptibility.

Authors:  Nicolò Paracini; Luke A Clifton; Maximilian W A Skoda; Jeremy H Lakey
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-23       Impact factor: 11.205

8.  Design, synthesis, and biological evaluation of α-hydroxyacyl-AMS inhibitors of amino acid adenylation enzymes.

Authors:  Tony D Davis; Poornima Mohandas; Maria I Chiriac; Glennon V Bythrow; Luis E N Quadri; Derek S Tan
Journal:  Bioorg Med Chem Lett       Date:  2016-09-16       Impact factor: 2.823

9.  Improved bacterial recombineering by parallelized protein discovery.

Authors:  Timothy M Wannier; Akos Nyerges; Helene M Kuchwara; Márton Czikkely; Dávid Balogh; Gabriel T Filsinger; Nathaniel C Borders; Christopher J Gregg; Marc J Lajoie; Xavier Rios; Csaba Pál; George M Church
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-28       Impact factor: 11.205

10.  Rapid Inhibition Profiling in Bacillus subtilis to Identify the Mechanism of Action of New Antimicrobials.

Authors:  Anne Lamsa; Javier Lopez-Garrido; Diana Quach; Eammon P Riley; Joe Pogliano; Kit Pogliano
Journal:  ACS Chem Biol       Date:  2016-06-14       Impact factor: 5.100

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