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Literature DB >> 26136576

Evolution of Influenza B Virus in Kuala Lumpur, Malaysia, between 1995 and 2008.

I-Ching Sam¹, Yvonne C F Su², Yoke Fun Chan³, Siti Sarah Nor'E⁴, Ardalinah Hassan³, Faizatul Lela Jafar³, Udayan Joseph², Rebecca A Halpin⁵, Elodie Ghedin⁶, Poh Sim Hooi⁷, Mathieu Fourment⁸, Hamimah Hassan³, Sazaly AbuBakar⁴, David E Wentworth⁵, Gavin J D Smith⁹.

Abstract

Influenza B virus causes significant disease but remains understudied in tropical regions. We sequenced 72 influenza B viruses collected in Kuala Lumpur, Malaysia, from 1995 to 2008. The predominant circulating lineage (Victoria or Yamagata) changed every 1 to 3 years, and these shifts were associated with increased incidence of influenza B. We also found poor lineage matches with recommended influenza virus vaccine strains. While most influenza B virus lineages in Malaysia were short-lived, one circulated for 3 to 4 years.

Entities: Species

Mesh：

Year: 2015 PMID： 26136576 PMCID： PMC4542393 DOI： 10.1128/JVI.00708-15

Source DB: PubMed Journal: J Virol ISSN： 0022-538X Impact factor: 5.103

22 in total

1. Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics.

Authors: Vladimir N Minin; Erik W Bloomquist; Marc A Suchard
Journal: Mol Biol Evol Date: 2008-04-11 Impact factor: 16.240

2. Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.

Authors: Elodie Ghedin; Naomi A Sengamalay; Martin Shumway; Jennifer Zaborsky; Tamara Feldblyum; Vik Subbu; David J Spiro; Jeff Sitz; Hean Koo; Pavel Bolotov; Dmitry Dernovoy; Tatiana Tatusova; Yiming Bao; Kirsten St George; Jill Taylor; David J Lipman; Claire M Fraser; Jeffery K Taubenberger; Steven L Salzberg
Journal: Nature Date: 2005-10-05 Impact factor: 49.962

3. Evaluation of Southern Hemisphere influenza vaccine recommendations.

Authors: Stephanie A Richard; Cécile Viboud; Mark A Miller
Journal: Vaccine Date: 2010-02-11 Impact factor: 3.641

4. Clinical features of Malaysian children hospitalized with community-acquired seasonal influenza.

Authors: I-Ching Sam; Aizuri Abdul-Murad; Rina Karunakaran; Sanjay Rampal; Yoke-Fun Chan; Anna Marie Nathan; Hany Ariffin
Journal: Int J Infect Dis Date: 2010-02-12 Impact factor: 3.623

5. Seasonal influenza virus strains circulating in Malaysia from 2005 to 2009.

Authors: Zainah Saat; Tg Rogayah Tg Abdul Rashid; Mohd Apandi Yusof; Fauziah M Kassim; Ravindran Thayan; Lau Sau Kuen; Khairul Azuan Othman; T S Saraswathy
Journal: Southeast Asian J Trop Med Public Health Date: 2010-11 Impact factor: 0.267

6. Single-reaction genomic amplification accelerates sequencing and vaccine production for classical and Swine origin human influenza a viruses.

Authors: Bin Zhou; Matthew E Donnelly; Derek T Scholes; Kirsten St George; Masato Hatta; Yoshihiro Kawaoka; David E Wentworth
Journal: J Virol Date: 2009-07-15 Impact factor: 5.103

7. The evolutionary dynamics of human influenza B virus.

Authors: Rubing Chen; Edward C Holmes
Journal: J Mol Evol Date: 2008-05-27 Impact factor: 2.395

8. Epidemiology and seasonality of respiratory viral infections in hospitalized children in Kuala Lumpur, Malaysia: a retrospective study of 27 years.

Authors: Chee-Sieng Khor; I-Ching Sam; Poh-Sim Hooi; Kia-Fatt Quek; Yoke-Fun Chan
Journal: BMC Pediatr Date: 2012-03-20 Impact factor: 2.125

9. The contrasting phylodynamics of human influenza B viruses.

Authors: Dhanasekaran Vijaykrishna; Edward C Holmes; Udayan Joseph; Mathieu Fourment; Yvonne C F Su; Rebecca Halpin; Raphael T C Lee; Yi-Mo Deng; Vithiagaran Gunalan; Xudong Lin; Timothy B Stockwell; Nadia B Fedorova; Bin Zhou; Natalie Spirason; Denise Kühnert; Veronika Bošková; Tanja Stadler; Anna-Maria Costa; Dominic E Dwyer; Q Sue Huang; Lance C Jennings; William Rawlinson; Sheena G Sullivan; Aeron C Hurt; Sebastian Maurer-Stroh; David E Wentworth; Gavin J D Smith; Ian G Barr
Journal: Elife Date: 2015-01-16 Impact factor: 8.140

10. Novel computational methods for increasing PCR primer design effectiveness in directed sequencing.

Authors: Kelvin Li; Anushka Brownley; Timothy B Stockwell; Karen Beeson; Tina C McIntosh; Dana Busam; Steve Ferriera; Sean Murphy; Samuel Levy
Journal: BMC Bioinformatics Date: 2008-04-11 Impact factor: 3.169

6 in total

1. Epidemiological and Evolutionary Dynamics of Influenza B Viruses in Malaysia, 2012-2014.

Authors: Xiang Yong Oong; Kim Tien Ng; Tommy Tsan-Yuk Lam; Yong Kek Pang; Kok Gan Chan; Nik Sherina Hanafi; Adeeba Kamarulzaman; Kok Keng Tee
Journal: PLoS One Date: 2015-08-27 Impact factor: 3.240

2. Whole-Genome Phylogenetic Analysis of Influenza B/Phuket/3073/2013-Like Viruses and Unique Reassortants Detected in Malaysia between 2012 and 2014.

Authors: Xiang Yong Oong; Kim Tien Ng; Joon Ling Tan; Kok Gan Chan; Adeeba Kamarulzaman; Yoke Fun Chan; I-Ching Sam; Kok Keng Tee
Journal: PLoS One Date: 2017-01-27 Impact factor: 3.240

3. Genome-wide evolutionary dynamics of influenza B viruses on a global scale.

Authors: Pinky Langat; Jayna Raghwani; Gytis Dudas; Thomas A Bowden; Stephanie Edwards; Astrid Gall; Trevor Bedford; Andrew Rambaut; Rodney S Daniels; Colin A Russell; Oliver G Pybus; John McCauley; Paul Kellam; Simon J Watson
Journal: PLoS Pathog Date: 2017-12-28 Impact factor: 6.823