Literature DB >> 26133359

Tn7-Based Device for Calibrated Heterologous Gene Expression in Pseudomonas putida.

Sebastian Zobel1, Ilaria Benedetti2, Lara Eisenbach1, Victor de Lorenzo2, Nick Wierckx1, Lars M Blank1.   

Abstract

The soil bacterium Pseudomonas putida is increasingly attracting considerable interest as a platform for advanced metabolic engineering through synthetic biology approaches. However, genomic context, gene copy number, and transcription/translation interplay often introduce considerable uncertainty to the design of reliable genetic constructs. In this work, we have established a standardized heterologous expression device in which the promoter strength is the only variable; the remaining parameters of the flow have stable default values. To this end, we tailored a mini-Tn7 delivery transposon vector that inserts the constructs in a single genomic locus of P. putida's chromosome. This was then merged with a promoter insertion site, an unvarying translational coupler, and a downstream location for placing the gene(s) of interest under fixed assembly rules. This arrangement was exploited to benchmark a collection of synthetic promoters with low transcriptional noise in this bacterial host. Growth experiments and flow cytometry with single-copy promoter-GFP constructs revealed a robust, constitutive behavior of these promoters, whose strengths and properties could be faithfully compared. This standardized expression device significantly extends the repertoire of tools available for reliable metabolic engineering and other genetic enhancements of P. putida.

Entities:  

Keywords:  Pseudomonas putida; Tn7 transposon; bicistronic design; synthetic biology; synthetic promoters; translational coupler

Mesh:

Substances:

Year:  2015        PMID: 26133359     DOI: 10.1021/acssynbio.5b00058

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  44 in total

1.  Genetic tools for reliable gene expression and recombineering in Pseudomonas putida.

Authors:  Taylor B Cook; Jacqueline M Rand; Wasti Nurani; Dylan K Courtney; Sophia A Liu; Brian F Pfleger
Journal:  J Ind Microbiol Biotechnol       Date:  2018-01-03       Impact factor: 3.346

2.  Sequential interspecies interactions affect production of antimicrobial secondary metabolites in Pseudomonas protegens DTU9.1.

Authors:  Morten Lindqvist Hansen; Mario Wibowo; Scott Alexander Jarmusch; Thomas Ostenfeld Larsen; Lars Jelsbak
Journal:  ISME J       Date:  2022-09-19       Impact factor: 11.217

3.  Towards synthetic PETtrophy: Engineering Pseudomonas putida for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase expression.

Authors:  Oliver F Brandenberg; Olga T Schubert; Leonid Kruglyak
Journal:  Microb Cell Fact       Date:  2022-06-18       Impact factor: 6.352

4.  Transcription factor levels enable metabolic diversification of single cells of environmental bacteria.

Authors:  Raúl Guantes; Ilaria Benedetti; Rafael Silva-Rocha; Víctor de Lorenzo
Journal:  ISME J       Date:  2015-12-04       Impact factor: 10.302

5.  Loss of a pyoverdine secondary receptor in Pseudomonas aeruginosa results in a fitter strain suitable for population invasion.

Authors:  Jaime González; Manuel Salvador; Özhan Özkaya; Matt Spick; Kate Reid; Catia Costa; Melanie J Bailey; Claudio Avignone Rossa; Rolf Kümmerli; José I Jiménez
Journal:  ISME J       Date:  2020-12-15       Impact factor: 10.302

6.  Creating metabolic demand as an engineering strategy in Pseudomonas putida - Rhamnolipid synthesis as an example.

Authors:  Till Tiso; Petra Sabelhaus; Beate Behrens; Andreas Wittgens; Frank Rosenau; Heiko Hayen; Lars Mathias Blank
Journal:  Metab Eng Commun       Date:  2016-08-08

7.  Regulation of solvent tolerance in Pseudomonas putida S12 mediated by mobile elements.

Authors:  Rohola Hosseini; Jannis Kuepper; Sebastian Koebbing; Lars M Blank; Nick Wierckx; Johannes H de Winde
Journal:  Microb Biotechnol       Date:  2017-04-11       Impact factor: 5.813

8.  Metabolic Engineering of Pseudomonas putida KT2440 to Produce Anthranilate from Glucose.

Authors:  Jannis Kuepper; Jasmin Dickler; Michael Biggel; Swantje Behnken; Gernot Jäger; Nick Wierckx; Lars M Blank
Journal:  Front Microbiol       Date:  2015-11-24       Impact factor: 5.640

9.  Combinatorial metabolic engineering of Pseudomonas putida KT2440 for efficient mineralization of 1,2,3-trichloropropane.

Authors:  Ting Gong; Xiaoqing Xu; You Che; Ruihua Liu; Weixia Gao; Fengjie Zhao; Huilei Yu; Jingnan Liang; Ping Xu; Cunjiang Song; Chao Yang
Journal:  Sci Rep       Date:  2017-08-01       Impact factor: 4.379

10.  Promoters from the itaconate cluster of Ustilago maydis are induced by nitrogen depletion.

Authors:  Thiemo Zambanini; Sandra K Hartmann; Lisa M Schmitz; Linda Büttner; Hamed Hosseinpour Tehrani; Elena Geiser; Melanie Beudels; Dominik Venc; Georg Wandrey; Jochen Büchs; Markus Schwarzländer; Lars M Blank; Nick Wierckx
Journal:  Fungal Biol Biotechnol       Date:  2017-11-28
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