Literature DB >> 2612437

Hydration structure in natural DNA observed by thermal neutron scattering.

H Grimm1, A Rupprecht.   

Abstract

Films of highly oriented Na- and LiDNA showing the typical X-ray diffraction patterns for the A-, B-, and C-conformation have been investigated by elastic and quasielastic neutron scattering. Information concerning the question of the DNA-water interaction has been obtained by varying the parameters H2O/D2O contrast, humidity, and temperature. Main observations are: A coexistence of one- and three-dimensionally correlated DNA which shifts towards the one-dimensionally correlated C-conformation for high humidity; a coexistence of A-, B-, and C-conformation for NaDNA with a similar humidity dependence; a factor of two increase between the average degree of localization of water hydrogens compared with DNA hydrogens at 75% r.h. for NaDNA; a strong water contribution to layer peaks which are close to the susceptibility maximum of water; a strong temperature dependence of the axial repeat distance for C-DNA; broad quasielastic spectra around the inverse of this distance. The observations are interpreted in terms of a competition between finite three-dimensional correlation and an optimized spatial resonance of nearly one-dimensionally correlated DNA with the correlation of bulk water. The observations are compatible with the concept of water spine formation (Dickerson 1983). The interpretation emphasizes the dynamic character of this mechanism in the region of nearly one-dimensionally correlated DNA.

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Year:  1989        PMID: 2612437     DOI: 10.1007/bf00284723

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  14 in total

1.  THE MOLECULAR CONFIGURATION OF DEOXYRIBONUCLEIC ACID. IV. X-RAY DIFFRACTION STUDY OF THE A FORM.

Authors:  W FULLER; M H WILKINS; H R WILSON; L D HAMILTON
Journal:  J Mol Biol       Date:  1965-05       Impact factor: 5.469

2.  Observation of acoustic umklapp-phonons in water-stabilized DNA by neutron scattering.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-10-12       Impact factor: 9.161

3.  The conformation of C-DNA.

Authors:  S Arnott; E Selsing
Journal:  J Mol Biol       Date:  1975-10-15       Impact factor: 5.469

4.  The molecular configuration of deoxyribonucleic acid. III. X-ray diffraction study of the C form of the lithium salt.

Authors:  D A MARVIN; M SPENCER; M H WILKINS; L D HAMILTON
Journal:  J Mol Biol       Date:  1961-10       Impact factor: 5.469

5.  A 2H-NMR study of the A-DNA conformation in films of oriented Na-DNA: evidence of a disordered B-DNA contribution.

Authors:  R Brandes; R R Vold; D R Kearns; A Rupprecht
Journal:  Biopolymers       Date:  1988-07       Impact factor: 2.505

6.  Optimised parameters for A-DNA and B-DNA.

Authors:  S Arnott; D W Hukins
Journal:  Biochem Biophys Res Commun       Date:  1972-06-28       Impact factor: 3.575

7.  Hydration of DNA: a neutron scattering study of oriented NaDNA.

Authors:  U Dahlborg
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

8.  Hydration of NaDNA by neutron quasi-elastic scattering.

Authors:  L J Schreiner; M M Pintar; A J Dianoux; F Volino; A Rupprecht
Journal:  Biophys J       Date:  1988-01       Impact factor: 4.033

9.  Ordered water structure around a B-DNA dodecamer. A quantitative study.

Authors:  M L Kopka; A V Fratini; H R Drew; R E Dickerson
Journal:  J Mol Biol       Date:  1983-01-05       Impact factor: 5.469

10.  Preparation of oriented DNA by wet spinning.

Authors:  A Rupprecht
Journal:  Acta Chem Scand       Date:  1966
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  3 in total

1.  Hydration of ds-DNA and ss-DNA by neutron quasielastic scattering.

Authors:  M Bastos; V Castro; G Mrevlishvili; J Teixeira
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

2.  Changes of hydration during conformational transitions of DNA.

Authors:  M Harmouchi; G Albiser; S Premilat
Journal:  Eur Biophys J       Date:  1990       Impact factor: 1.733

3.  Infrared linear dichroism studies of DNA-drug complexes: quantitative determination of the drug-induced restriction of the B-A transition.

Authors:  H Fritzsche
Journal:  Nucleic Acids Res       Date:  1994-03-11       Impact factor: 16.971

  3 in total

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