Literature DB >> 26123835

Enrichment of single neurons and defined brain regions from human brain tissue samples for subsequent proteome analysis.

Mariana Molina1, Simone Steinbach, Young Mok Park, Su Yeong Yun, Ana Tereza Di Lorenzo Alho, Helmut Heinsen, Lea T Grinberg, Katrin Marcus, Renata E Paraizo Leite, Caroline May.   

Abstract

Brain function in normal aging and neurological diseases has long been a subject of interest. With current technology, it is possible to go beyond descriptive analyses to characterize brain cell populations at the molecular level. However, the brain comprises over 100 billion highly specialized cells, and it is a challenge to discriminate different cell groups for analyses. Isolating intact neurons is not feasible with traditional methods, such as tissue homogenization techniques. The advent of laser microdissection techniques promises to overcome previous limitations in the isolation of specific cells. Here, we provide a detailed protocol for isolating and analyzing neurons from postmortem human brain tissue samples. We describe a workflow for successfully freezing, sectioning and staining tissue for laser microdissection. This protocol was validated by mass spectrometric analysis. Isolated neurons can also be employed for western blotting or PCR. This protocol will enable further examinations of brain cell-specific molecular pathways and aid in elucidating distinct brain functions.

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Year:  2015        PMID: 26123835     DOI: 10.1007/s00702-015-1414-4

Source DB:  PubMed          Journal:  J Neural Transm (Vienna)        ISSN: 0300-9564            Impact factor:   3.575


  55 in total

Review 1.  Microdissection of histologic sections: past, present, and future.

Authors:  Isam A Eltoum; Gene P Siegal; Andra R Frost
Journal:  Adv Anat Pathol       Date:  2002-09       Impact factor: 3.875

2.  Discovering the phosphoproteome of the hydrophobic cytochrome c oxidase membrane protein complex.

Authors:  Stefan Helling; Maik Hüttemann; Bernhard Kadenbach; Rabia Ramzan; Sebastian Vogt; Katrin Marcus
Journal:  Methods Mol Biol       Date:  2012

3.  Proteomic analysis and comparison of the biopsy and autopsy specimen of human brain temporal lobe.

Authors:  Sizhi He; Qingsong Wang; Jintang He; Hai Pu; Wei Yang; Jianguo Ji
Journal:  Proteomics       Date:  2006-09       Impact factor: 3.984

4.  Toward the complete membrane proteome: high coverage of integral membrane proteins through transmembrane peptide detection.

Authors:  Frank Fischer; Dirk Wolters; Matthias Rögner; Ansgar Poetsch
Journal:  Mol Cell Proteomics       Date:  2005-11-16       Impact factor: 5.911

5.  Identification of proteins in human substantia nigra.

Authors:  Efstathia Kitsou; Sheng Pan; Jianpeng Zhang; Min Shi; Aram Zabeti; Dennis W Dickson; Roger Albin; Marla Gearing; Daniel T Kashima; Yan Wang; Richard P Beyer; Yong Zhou; Catherine Pan; W Michael Caudle; Jing Zhang
Journal:  Proteomics Clin Appl       Date:  2008-05       Impact factor: 3.494

6.  Ageing of substantia nigra in humans: cell loss may be compensated by hypertrophy.

Authors:  C R Cabello; J J Thune; H Pakkenberg; B Pakkenberg
Journal:  Neuropathol Appl Neurobiol       Date:  2002-08       Impact factor: 8.090

Review 7.  Ageing and neuronal vulnerability.

Authors:  Mark P Mattson; Tim Magnus
Journal:  Nat Rev Neurosci       Date:  2006-04       Impact factor: 34.870

Review 8.  Proteomics in neurodegenerative diseases: Methods for obtaining a closer look at the neuronal proteome.

Authors:  Sarah Plum; Simone Steinbach; Laura Abel; Katrin Marcus; Stefan Helling; Caroline May
Journal:  Proteomics Clin Appl       Date:  2014-11-10       Impact factor: 3.494

9.  Combined enrichment of neuromelanin granules and synaptosomes from human substantia nigra pars compacta tissue for proteomic analysis.

Authors:  S Plum; S Helling; C Theiss; R E P Leite; C May; W Jacob-Filho; M Eisenacher; K Kuhlmann; H E Meyer; P Riederer; L T Grinberg; M Gerlach; K Marcus
Journal:  J Proteomics       Date:  2013-08-03       Impact factor: 4.044

10.  Toluidine blue: A review of its chemistry and clinical utility.

Authors:  Gokul Sridharan; Akhil A Shankar
Journal:  J Oral Maxillofac Pathol       Date:  2012-05
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  8 in total

1.  Proteomic analysis of neurons microdissected from formalin-fixed, paraffin-embedded Alzheimer's disease brain tissue.

Authors:  Eleanor S Drummond; Shruti Nayak; Beatrix Ueberheide; Thomas Wisniewski
Journal:  Sci Rep       Date:  2015-10-21       Impact factor: 4.379

2.  Proteomic characterization of neuromelanin granules isolated from human substantia nigra by laser-microdissection.

Authors:  Sarah Plum; Simone Steinbach; Johannes Attems; Sharon Keers; Peter Riederer; Manfred Gerlach; Caroline May; Katrin Marcus
Journal:  Sci Rep       Date:  2016-11-14       Impact factor: 4.379

3.  Morphological Plasticity of Emerging Purkinje Cells in Response to Exogenous VEGF.

Authors:  Leonard Herrfurth; Verena Theis; Veronika Matschke; Caroline May; Katrin Marcus; Carsten Theiss
Journal:  Front Mol Neurosci       Date:  2017-01-30       Impact factor: 5.639

4.  Protective effects on the retina after ranibizumab treatment in an ischemia model.

Authors:  Stephanie C Joachim; Marina Renner; Jacqueline Reinhard; Carsten Theiss; Caroline May; Stephanie Lohmann; Sabrina Reinehr; Gesa Stute; Andreas Faissner; Katrin Marcus; H Burkhard Dick
Journal:  PLoS One       Date:  2017-08-11       Impact factor: 3.240

5.  IgA autoantibodies against native myelin basic protein in a patient with MS.

Authors:  Heike Schumacher; Nina K Wenke; Jakob Kreye; Markus Höltje; Katrin Marcus; Caroline May; Harald Prüss
Journal:  Neurol Neuroimmunol Neuroinflamm       Date:  2019-05-01

6.  Blood Contamination in CSF and Its Impact on Quantitative Analysis of Alpha-Synuclein.

Authors:  Katalin Barkovits; Niels Kruse; Andreas Linden; Lars Tönges; Kathy Pfeiffer; Brit Mollenhauer; Katrin Marcus
Journal:  Cells       Date:  2020-02-05       Impact factor: 6.600

7.  The use of localized proteomics to identify the drivers of Alzheimer's disease pathogenesis.

Authors:  Eleanor Drummond; Thomas Wisniewski
Journal:  Neural Regen Res       Date:  2017-06       Impact factor: 5.135

8.  Neuronal subclass-selective proteomic analysis in Caenorhabditis elegans.

Authors:  Shunsuke Aburaya; Yuji Yamauchi; Takashi Hashimoto; Hiroyoshi Minakuchi; Wataru Aoki; Mitsuyoshi Ueda
Journal:  Sci Rep       Date:  2020-08-13       Impact factor: 4.379

  8 in total

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