Literature DB >> 26122721

Video-tracking of zebrafish (Danio rerio) as a biological early warning system using two distinct artificial neural networks: Probabilistic neural network (PNN) and self-organizing map (SOM).

Luis Oliva Teles1, Miguel Fernandes1, João Amorim2, Vitor Vasconcelos1.   

Abstract

Biological early warning systems (BEWS) are becoming very important tools in ecotoxicological studies because they can detect changes in the behavior of organisms exposed to toxic substances. In this work, a video tracking system was fully developed to detect the presence of commercial bleach (NaOCl) in water in three different concentrations (0.0005%; 0.0010% and 0.0020% (v/v)) during one hour of exposure. Zebrafish was selected as the test organism because it is widely used in many different areas and studies. Two distinct statistical models were developed, using probabilistic neural network (PNN) and correspondence analysis associated with self-organizing map (SOM-CA). The diagnosis was based only in the analysis of a few behavioral components of the fish, namely: mean angular velocity, mean linear velocity, spatial dispersion, mean value of the X coordinate and mean value of the Y coordinate. Both models showed good results in their diagnosis capabilities. However, the overall performance (accuracy) was always superior in the PNN model. The worst result was with the SOM-CA model, at the lowest concentration (0.0005% v/v), achieving only 65% of correct diagnosis. The best result was with the PNN model, at the highest concentration (0.0020% v/v), achieving 94% of correct diagnosis.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Artificial neural networks; Biological early warning systems; Video tracking; Zebrafish

Mesh:

Substances:

Year:  2015        PMID: 26122721     DOI: 10.1016/j.aquatox.2015.06.008

Source DB:  PubMed          Journal:  Aquat Toxicol        ISSN: 0166-445X            Impact factor:   4.964


  7 in total

1.  Resilience assessment of a biological early warning system based on the locomotor behavior of zebrafish (Danio rerio).

Authors:  Miguel Fernandes; João Amorim; Vitor Vasconcelos; Luis Oliva Teles
Journal:  Environ Sci Pollut Res Int       Date:  2016-06-20       Impact factor: 4.223

2.  Evaluation of the sensitivity spectrum of a video tracking system with zebrafish (Danio rerio) exposed to five different toxicants.

Authors:  João Amorim; Miguel Fernandes; Vitor Vasconcelos; Luis Oliva Teles
Journal:  Environ Sci Pollut Res Int       Date:  2017-05-23       Impact factor: 4.223

3.  Stress test of a biological early warning system with zebrafish (Danio rerio).

Authors:  João Amorim; Miguel Fernandes; Vitor Vasconcelos; Luis Oliva Teles
Journal:  Ecotoxicology       Date:  2016-10-07       Impact factor: 2.823

4.  Enantio-alteration of gene transcription associated with bioconcentration in adult zebrafish (Danio rerio) exposed to chiral PCB149.

Authors:  Tingting Chai; Feng Cui; Pengqian Mu; Yang Yang; Nana Xu; Zhiqiang Yin; Qi Jia; Shuming Yang; Jing Qiu; Chengju Wang
Journal:  Sci Rep       Date:  2016-01-20       Impact factor: 4.379

5.  Early detection of cyanide, organophosphate and rodenticide pollution based on locomotor activity of zebrafish larvae.

Authors:  Binjie Wang; Junhao Zhu; Anli Wang; Jiye Wang; Yuanzhao Wu; Weixuan Yao
Journal:  PeerJ       Date:  2021-12-22       Impact factor: 2.984

6.  Reducing the Number of Individuals to Monitor Shoaling Fish Systems - Application of the Shannon Entropy to Construct a Biological Warning System Model.

Authors:  Harkaitz Eguiraun; Oskar Casquero; Asgeir J Sørensen; Iciar Martinez
Journal:  Front Physiol       Date:  2018-05-08       Impact factor: 4.566

7.  Indication of Electromagnetic Field Exposure via RBF-SVM Using Time-Series Features of Zebrafish Locomotion.

Authors:  Yaqing He; Kim Fung Tsang; Richard Yuen-Chong Kong; Yuk-Tak Chow
Journal:  Sensors (Basel)       Date:  2020-08-26       Impact factor: 3.576

  7 in total

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