| Literature DB >> 26121353 |
Arundhati Das1, Harini Nagendra2, Madhur Anand3, Milind Bunyan4.
Abstract
The objective of this analysis was to identify topographic and bioclimatic factors that predict occurrence of forest and grassland patches within tropical montane forest-grassland mosaics. We further investigated whether interactions between topography and bioclimate are important in determining vegetation pattern, and assessed the role of spatial scale in determining the relative importance of specific topographic features. Finally, we assessed the role of elevation in determining the relative importance of diverse explanatory factors. The study area consists of the central and southern regions of the Western Ghats of Southern India, a global biodiversity hotspot. Random forests were used to assess prediction accuracy and predictor importance. Conditional inference classification trees were used to interpret predictor effects and examine potential interactions between predictors. GLMs were used to confirm predictor importance and assess the strength of interaction terms. Overall, topographic and bioclimatic predictors classified vegetation pattern with approximately 70% accuracy. Prediction accuracy was higher for grassland than forest, and for mosaics at higher elevations. Elevation was the most important predictor, with mosaics above 2000 m dominated largely by grassland. Relative topographic position measured at a local scale (within a 300 m neighbourhood) was another important predictor of vegetation pattern. In high elevation mosaics, northness and concave land surface curvature were important predictors of forest occurrence. Important bioclimatic predictors were: dry quarter precipitation, annual temperature range and the interaction between the two. The results indicate complex interactions between topography and bioclimate and among topographic variables. Elevation and topography have a strong influence on vegetation pattern in these mosaics. There were marked regional differences in the roles of various topographic and bioclimatic predictors across the range of study mosaics, indicating that the same pattern of grass and forest seems to be generated by different sets of mechanisms across the region, depending on spatial scale and elevation.Entities:
Mesh:
Year: 2015 PMID: 26121353 PMCID: PMC4488301 DOI: 10.1371/journal.pone.0130566
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Map of study area.
Map of the Western Ghats showing locations of montane forest-grassland mosaics and inset showing a section of an Indian Remote Sensing Satellite (P6) image of one of the study mosaics with sample points (superimposed in red) spaced 500m apart. Map created using ArcGIS (ESRI) software.
List of 27 topographic and bioclimatic predictors used for analysis and their ranges over the dataset.
| Name | Code | Range | Description | Reference |
|---|---|---|---|---|
| Elevation | elev | 455–2555m | Elevation of 30m pixel | [ |
| Slope | slope | 0.75–62.15 degrees | Local slope at 30m resolution | [ |
| Ruggedness Index | rugged | 4.24–157.46m | Terrain heterogeneity over a 3x3 cell neighborhood using a 90m DEM | [ |
| Sine Aspect/ Cosine Aspect | sin.asp/ cos.asp | -1.00–1.00 | E-W and N-S transformation of aspect at 30m resolution | [ |
| Beers Aspect | Beers | 0–2.00 | SW-NE transformation of aspect at 30m resolution | [ |
| Curvature 30m | curve30 | -7.9–8.45 | Combined across and along slope curvature, using a 30m pixel and 3x3 cell window | [ |
| Curvature 90m | curve90 | -3.3–4.04 | Combined curvature, using a 90m pixel and 3x3 cell window | [ |
| Local scale topographic position index | tpi3.10 | -90.93–120.75m | Average difference in elevation between a focal cell and neighborhood defined using an annulus of inner radius 90m and outer radius 300m | [ |
| Intermediate scale topographic position index | tpi10.34 | -271.77–345.8 m | TPI using an annulus of inner radius 300m and outer radius 1020m | [ |
| Landscape scale topographic position index | tpi10.67 | -384.3–508.76 m | TPI using an annulus of inner radius 300m and outer radius 2010m | [ |
| TCI 30m | tci30 | 0–366 | Topographic convergence index using a 30m pixel | [ |
| TCI 60m | tci60 | -0.03–13.21 | Topographic convergence index using a 60m pixel | [ |
| TCI 90m | tci90 | -0.56–11.02 | Topographic convergence index using a 90m pixel | [ |
| Distance to coast | coast.dist | 25.27–174.11 km | Euclidean distance to coast line | |
| Solar radiation | solar | 0.15–0.44 MJ/cm2/yr | Potential annual direct solar radiation based on latitude, slope and aspect. | [ |
| Max. temperature warmest month | max.tmp | 19–33°C | [ | |
| Min. temperature | min.tmp | 4.1–20.5°C | Min. temperature in coldest month | [ |
| Annual temperature range | anntmprng | 10.5–18.2°C | [ | |
| Temperature seasonality | tmp.seas | 891–1783 | Temperature seasonality (standard deviation of temperature over the year*100) | [ |
| Mean temperature dry quarter | meantmp.dry | 11.9–25.5°C | Mean temp from Jan-Mar | [ |
| Mean temperature warm quarter | meantmp.warm | 13.9–27.5°C | Mean temp from Mar-May | [ |
| Mean temperature cold quarter | meantmp.cold | 11.2–24.3°C | Mean temp from Nov-Jan | [ |
| Annual precipitation | annprec | 754–6080 mm | Mean annual precipitation | [ |
| Precipitation CV | prec.cv | 50–140 | Precipitation seasonality (coefficient of variation based on monthly precipitation values) | [ |
| Warm quarter precipitation | warm.prec | 165–893 mm | Avg. precipitation from Mar-May | [ |
| Dry quarter precipitation | dry.prec | 7–138 mm | Precipitation from Jan-Mar | [ |
Fig 2Boxplots showing distribution of permutation-based variable importance measures from random forests.
Permutation-based variable importance measures for each predictor derived from multiple random forest runs for a) all mosaics b) Nilgiris and Eravikulam plateaus (> 1500m elevation). Please refer to Table 1 for explanation of predictor codes.
Fig 3Conditional inference classification tree for forest and grassland points in forest-grassland mosaics of the Western Ghats.
Node purity of terminal nodes depicted in bar charts with dark grey assigned to “forest” and light grey to “grass”. Terminal node identity numbers are given below each bar chart. For geographic breakdown of data points in each terminal node see S1 Fig. Please refer to Table 1 for explanation of predictor codes.
Fig 4Conditional inference classification tree for forest and grass points in forest-grassland mosaics of the Nilgiris and Eravikulam (> 1500m elevation).
Node purity of terminal nodes depicted as a bar chart with dark grey assigned to “forest” and light grey to “grass”. Terminal node identity numbers are given below each bar chart. Please refer to Table 1 for explanation of predictor codes.
Assessment of the importance of predictors used to model forest points within montane forest grassland mosaics across the Western Ghats.
| Predictor | Summed Akaike weight | Standardized, model-averaged beta (SE) | Model averaged 95% CI |
|---|---|---|---|
| elevation | ~1 | -1.014 (0.094) | -1.199: -0.829 |
| dry.prec | ~1 | 0.92 (0.117) | 0.69: 1.15 |
| tpi3.10 | 0.999 | -0.449 (0.085) | -0.616: -0.283 |
| anntmprng | 0.999 | 0.36 (0.08) | 0.204: 0.516 |
| anntmprng:dry.prec | 0.999 | 0.323 (0.056) | 0.214: 0.432 |
| curve90 | 0.579 | -0.259 (0.063) | -0.383: -0.136 |
| cos.aspect | 0.379 | 0.204 (0.05) | 0.107: 0.301 |
| elevation:tpi3.10 | 0.029 | 0.19 (0.055) | 0.082: 0.298 |
| annprec | 0.008 | -0.304 (0.099) | -0.498: -0.109 |
| coast.dist | 0.002 | 0.202 (0.087) | 0.031: 0.372 |
| elevation:dry.prec | 0.0009 | -0.173 (0.077) | -0.323: -0.022 |
| tci90 | 0.0003 | 0.091 (0.056) | -0.018: 0.2 |
| tpi10.67 | 0.0002 | -0.091 (0.062) | -0.211: 0.03 |
| dry.prec:tpi3.10 | 0.0001 | 0.061 (0.056) | -0.05: 0.171 |
| rugged | 0.0001 | 0.003 (0.05) | -0.096: 0.102 |
| dist.coast:elevation | 0.0001 | -0.571 (0.113) | -0.792: -0.35 |
| cos.aspect:elevation | ~0 | 0.163 (0.051) | 0.063: 0.263 |
| elevation:tci90 | ~0 | -0.209 (0.055) | -0.318: -0.1 |
| curve90:elevation | ~0 | 0.051 (0.058) | -0.063: 0.165 |
| dry.prec:tci90 | ~0 | -0.108 (0.06) | -0.226: 0.01 |
| cos.aspect:coast.dist | ~0 | 0.062 (0.052) | -0.04: 0.164 |
Columns show summed Akaike weights, standardized beta coefficients averaged across models and unconditional standard errors (SE) in parentheses and 95% confidence intervals (CI) based on the unconditional SEs.
aPlease refer to Table 1 for explanation of predictor codes
Assessment of the importance of predictors used to model forest points within montane forest grassland mosaics above 1500m elevation in the Nilgiris and Eravikulam.
| Predictor | Summed Akaike weight | Standardized, model-averaged beta (SE) | Model averaged 95% CI |
|---|---|---|---|
| elevation | 1 | -1.529 (0.14) | -1.804: -1.254 |
| anntmprng | 0.999 | 0.819 (0.169) | 0.489: 1.15 |
| cos.aspect | 0.999 | 0.42 (0.088) | 0.247: 0.592 |
| curve90 | 0.996 | -0.489 (0.117) | -0.718: -0.259 |
| coast.dist | 0.537 | 0.248 (0.112) | 0.029: 0.467 |
| cos.aspect:coast.dist | 0.377 | 0.269 (0.091) | 0.09: 0.447 |
| tci90 | 0.223 | -0.189 (0.106) | -0.397: 0.019 |
| tpi3.10 | 0.187 | -0.214 (0.111) | -0.433: 0.004 |
| elevation:curve90 | 0.172 | -0.191 (0.094) | -0.375: -0.006 |
| elevation:tci90 | 0.094 | -0.319 (0.121) | -0.557: -0.082 |
| dry.prec | 0.058 | 0.308 (0.233) | -0.149: 0.765 |
| anntmprng:curve90 | 0.057 | -0.152 (0.111) | -0.37: 0.066 |
| tpi10.67 | 0.053 | -0.14 (0.106) | -0.349: 0.068 |
| elevation:tpi3.10 | 0.039 | 0.227 (0.102) | 0.026: 0.428 |
| cos.aspect:elevation | 0.035 | 0.098 (0.1) | -0.098: 0.294 |
| annprec | 0.025 | -0.043 (0.11) | -0.259: 0.173 |
| anntmprng:elevation | 0.024 | -0.054 (0.136) | -0.321: 0.213 |
| rugged | 0.023 | 0.029 (0.093) | -0.154: 0.213 |
| coast.dist:elevation | 0.014 | 0.182 (0.122) | -0.057: 0.422 |
| cos.aspect:tci90 | 0.010 | -0.167 (0.087) | -0.338: 0.003 |
| cos.aspect:tpi3.10 | 0.009 | 0.13 (0.095) | -0.056: 0.316 |
| dry.pre:elevation | 0.001 | 0.016 (0.134) | -0.248: 0.28 |
| anntmprng:dry.pre | 0.001 | 0.025 (0.201) | -0.371: 0.42 |
Columns show summed Akaike weights, standardized beta coefficients averaged across models (unconditional standard errors SE in parentheses) and 95% confidence intervals (CI) based on the unconditional SEs.
aPlease refer to Table 1 for explanation of predictor codes