Literature DB >> 26117647

Pentamidine analogs as inhibitors of [(3)H]MK-801 and [(3)H]ifenprodil binding to rat brain NMDA receptors.

Michael L Berger1, Dorota Maciejewska2, Jean Jacques Vanden Eynde3, Madhusoodanan Mottamal4, Jerzy Żabiński2, Paweł Kaźmierczak2, Mateusz Rezler2, Ivana Jarak5, Ivo Piantanida5, Grace Karminski-Zamola5, Annie Mayence4, Patrick Rebernik6, Arvind Kumar7, Mohamed A Ismail7, David W Boykin7, Tien L Huang4.   

Abstract

The anti-protozoal drug pentamidine is active agan class="Chemical">inst opportunistic Pneumocystis pneumonia, but in addition has several other biological targets, including the NMDA receptor (NR). Here we describe the inhibitory potencies of 76 pentamidine analogs at 2 binding sites of the NR, the channel binding site labeled with [(3)H]MK-801 and the [(3)H]ifenprodil binding site. Most analogs acted weaker at the ifenprodil than at the channel site. The spermine-sensitivity of NR inhibition by the majority of the compounds was reminiscent of other long-chain dicationic NR blockers. The potency of the parent compound as NR blocker was increased by modifying the heteroatoms in the bridge connecting the 2 benzamidine moieties and also by integrating the bridge into a seven-membered ring. Docking of the 45 most spermine-sensitive bisbenzamidines to a recently described acidic interface between the N-terminal domains of GluN1 and GluN2B mediating polyamine stimulation of the NR revealed the domain contributed by GluN1 as the most relevant target.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Alkylation; Bisbenzamidine; Coupling; Ifenprodil; Molecular docking; NMDA receptor; Pentamidine; Polyamine; Radioligand binding; Rat brain

Mesh:

Substances:

Year:  2015        PMID: 26117647      PMCID: PMC4910395          DOI: 10.1016/j.bmc.2015.06.012

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  49 in total

1.  Diarylamidines: high potency inhibitors of acid-sensing ion channels.

Authors:  Xuanmao Chen; Liyan Qiu; Minghua Li; Stefan Dürrnagel; Beverley A Orser; Zhi-Gang Xiong; John F MacDonald
Journal:  Neuropharmacology       Date:  2010-01-28       Impact factor: 5.250

2.  Analogues of 1,5-bis(4-amidinophenoxy)pentane (pentamidine) in the treatment of experimental Pneumocystis carinii pneumonia.

Authors:  R R Tidwell; S K Jones; J D Geratz; K A Ohemeng; M Cory; J E Hall
Journal:  J Med Chem       Date:  1990-04       Impact factor: 7.446

Review 3.  Some non-conventional biomolecular targets for diamidines. A short survey.

Authors:  Tien L Huang; Annie Mayence; Jean Jacques Vanden Eynde
Journal:  Bioorg Med Chem       Date:  2014-03-05       Impact factor: 3.641

4.  Polyamines and the NMDA receptor: modifying intrinsic activities with aromatic substituents.

Authors:  Michael L Berger; Abdallah Y Bitar; Matthew J Waitner; Patrick Rebernik; Mary C O'Sullivan
Journal:  Bioorg Med Chem Lett       Date:  2006-03-24       Impact factor: 2.823

5.  Studies on the effects of several pentamidine analogues on the NMDA receptor.

Authors:  I J Reynolds; D M Zeleski; K D Rothermund; K A Hartnett; R Tidwell; E Aizenman
Journal:  Eur J Pharmacol       Date:  1993-01-15       Impact factor: 4.432

6.  Novel pentamidine derivatives: synthesis, anti-tumor properties and polynucleotide-binding activities.

Authors:  Ivana Jarak; Marko Marjanović; Ivo Piantanida; Marijeta Kralj; Grace Karminski-Zamola
Journal:  Eur J Med Chem       Date:  2011-04-15       Impact factor: 6.514

7.  Thiophene-based diamidine forms a "super" at binding minor groove agent.

Authors:  Sirish Mallena; Michael P H Lee; Christian Bailly; Stephen Neidle; Arvind Kumar; David W Boykin; W David Wilson
Journal:  J Am Chem Soc       Date:  2004-10-27       Impact factor: 15.419

8.  Synthesis and SAR of alkanediamide-linked bisbenzamidines with anti-trypanosomal and anti-pneumocystis activity.

Authors:  Tien L Huang; Jean Jacques Vanden Eynde; Annie Mayence; Margaret S Collins; Melanie T Cushion; Donna Rattendi; Indira Londono; Lakshman Mazumder; Cyrus J Bacchi; Nigel Yarlett
Journal:  Bioorg Med Chem Lett       Date:  2009-08-23       Impact factor: 2.823

9.  Triheteromeric NMDA receptors at hippocampal synapses.

Authors:  Kenneth R Tovar; Matthew J McGinley; Gary L Westbrook
Journal:  J Neurosci       Date:  2013-05-22       Impact factor: 6.167

10.  Design of DNA minor groove binding diamidines that recognize GC base pair sequences: a dimeric-hinge interaction motif.

Authors:  Manoj Munde; Mohamed A Ismail; Reem Arafa; Paul Peixoto; Catharine J Collar; Yang Liu; Laixing Hu; Marie-Hélène David-Cordonnier; Amélie Lansiaux; Christian Bailly; David W Boykin; W David Wilson
Journal:  J Am Chem Soc       Date:  2007-10-13       Impact factor: 15.419

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  1 in total

1.  High-Throughput Patch Clamp Screening in Human α6-Containing Nicotinic Acetylcholine Receptors.

Authors:  Lucas C Armstrong; Glenn E Kirsch; Nikolai B Fedorov; Caiyun Wu; Yuri A Kuryshev; Abby L Sewell; Zhiqi Liu; Arianne L Motter; Carmine S Leggett; Michael S Orr
Journal:  SLAS Discov       Date:  2017-03-15       Impact factor: 3.341

  1 in total

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