Literature DB >> 26117326

Bioinformatics analyses provide insight into distant homology of the Keap1-Nrf2 pathway.

Ranko Gacesa1, Walter C Dunlap1, Paul F Long2.   

Abstract

An essential requirement for the evolution of early eukaryotic life was the development of effective means to protect against metabolic oxidative stress and exposure to environmental toxicants. In present-day mammals, the master transcription factor Nrf2 regulates basal level homeostasis and inducible expression of numerous detoxifying and antioxidant genes. To examine early evolution of the Keap1-Nrf2 pathway, we present bioinformatics analyses of distant homology of mammalian Keap1 and Nrf2 proteins across the Kingdoms of Life. Software written for this analysis is made freely available on-line. Furthermore, utilizing protein modeling and virtual screening methods, we demonstrate potential for Nrf2 activation by competitive inhibition of its binding to Keap1, specifically by UV-protective fungal mycosporines and marine mycosporine-like amino acids (MAAs). We contend that coevolution of Nrf2-activating secondary metabolites by fungi and other extant microbiota may provide prospective compound leads for the design of new therapeutics to target activation of the human Keap1-Nrf2 pathway for treating degenerative diseases of ageing.
Copyright © 2015. Published by Elsevier Inc.

Entities:  

Keywords:  Adaptation of microbiota; Distant Homology Search Pipeline; Mycosporine-like amino acids; Mycosporines; Protein modeling; Sordariomycetes; Taxonomy Landscape Mapper; Virtual screening

Mesh:

Substances:

Year:  2015        PMID: 26117326     DOI: 10.1016/j.freeradbiomed.2015.06.015

Source DB:  PubMed          Journal:  Free Radic Biol Med        ISSN: 0891-5849            Impact factor:   7.376


  10 in total

1.  CRISPR-Generated Nrf2a Loss- and Gain-of-Function Mutants Facilitate Mechanistic Analysis of Chemical Oxidative Stress-Mediated Toxicity in Zebrafish.

Authors:  Margaret G Mills; Richard Ramsden; Eva Y Ma; Jone Corrales; Lauren A Kristofco; W Baylor Steele; Gavin N Saari; Fjodor Melnikov; Jakub Kostal; Terrance J Kavanagh; Julie B Zimmerman; Adelina M Voutchkova-Kostal; Bryan W Brooks; Philip Coish; Paul T Anastas; Evan Gallagher
Journal:  Chem Res Toxicol       Date:  2020-01-08       Impact factor: 3.739

Review 2.  Artemisinin Action and Resistance in Plasmodium falciparum.

Authors:  Leann Tilley; Judith Straimer; Nina F Gnädig; Stuart A Ralph; David A Fidock
Journal:  Trends Parasitol       Date:  2016-06-09

3.  Crystal structure of dipeptidyl peptidase III from the human gut symbiont Bacteroides thetaiotaomicron.

Authors:  Igor Sabljić; Nevenka Meštrović; Bojana Vukelić; Peter Macheroux; Karl Gruber; Marija Luić; Marija Abramić
Journal:  PLoS One       Date:  2017-11-02       Impact factor: 3.240

4.  Identification of Non-Electrophilic Nrf2 Activators from Approved Drugs.

Authors:  Qing-Ye Zhang; Xin-Yi Chu; Ling-Han Jiang; Meng-Yuan Liu; Zhi-Ling Mei; Hong-Yu Zhang
Journal:  Molecules       Date:  2017-05-26       Impact factor: 4.411

5.  Molecular photoprotection of human keratinocytes in vitro by the naturally occurring mycosporine-like amino acid palythine.

Authors:  K P Lawrence; R Gacesa; P F Long; A R Young
Journal:  Br J Dermatol       Date:  2018-03-25       Impact factor: 9.302

6.  OsKEAP1 Interacts with OsABI5 and Its Downregulation Increases the Transcription of OsABI5 and the ABA Response Genes in Germinating Rice Seeds.

Authors:  Yan-Hua Liu; Meng Jiang; Rui-Qing Li; Jian-Zhong Huang; Qing-Yao Shu
Journal:  Plants (Basel)       Date:  2021-03-11

7.  Identification of Natural Products as SENP2 Inhibitors for Targeted Therapy in Heart Failure.

Authors:  Somayye Taghvaei; Farzaneh Sabouni; Zarrin Minuchehr
Journal:  Front Pharmacol       Date:  2022-04-01       Impact factor: 5.988

8.  Rising levels of atmospheric oxygen and evolution of Nrf2.

Authors:  Ranko Gacesa; Walter C Dunlap; David J Barlow; Roman A Laskowski; Paul F Long
Journal:  Sci Rep       Date:  2016-06-14       Impact factor: 4.379

9.  The mycosporine-like amino acids porphyra-334 and shinorine are antioxidants and direct antagonists of Keap1-Nrf2 binding.

Authors:  Ranko Gacesa; Karl P Lawrence; Nikolaos D Georgakopoulos; Kazuo Yabe; Walter C Dunlap; David J Barlow; Geoffrey Wells; Antony R Young; Paul F Long
Journal:  Biochimie       Date:  2018-07-30       Impact factor: 4.079

10.  Keap1-MCM3 interaction is a potential coordinator of molecular machineries of antioxidant response and genomic DNA replication in metazoa.

Authors:  Nele Tamberg; Siret Tahk; Sandra Koit; Kersti Kristjuhan; Sergo Kasvandik; Arnold Kristjuhan; Ivar Ilves
Journal:  Sci Rep       Date:  2018-08-14       Impact factor: 4.379

  10 in total

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