Literature DB >> 26114027

Acceleration of dynamic fluorescence molecular tomography with principal component analysis.

Guanglei Zhang1, Wei He2, Huangsheng Pu3, Fei Liu4, Maomao Chen3, Jing Bai3, Jianwen Luo5.   

Abstract

Dynamic fluorescence molecular tomography (FMT) is an attractive imaging technique for three-dimensionally resolving the metabolic process of fluorescent biomarkers in small animal. When combined with compartmental modeling, dynamic FMT can be used to obtain parametric images which can provide quantitative pharmacokinetic information for drug development and metabolic research. However, the computational burden of dynamic FMT is extremely huge due to its large data sets arising from the long measurement process and the densely sampling device. In this work, we propose to accelerate the reconstruction process of dynamic FMT based on principal component analysis (PCA). Taking advantage of the compression property of PCA, the dimension of the sub weight matrix used for solving the inverse problem is reduced by retaining only a few principal components which can retain most of the effective information of the sub weight matrix. Therefore, the reconstruction process of dynamic FMT can be accelerated by solving the smaller scale inverse problem. Numerical simulation and mouse experiment are performed to validate the performance of the proposed method. Results show that the proposed method can greatly accelerate the reconstruction of parametric images in dynamic FMT almost without degradation in image quality.

Entities:  

Keywords:  (100.3190) Inverse problems; (170.3010) Image reconstruction techniques; (170.3880) Medical and biological imaging; (170.6960) Tomography

Year:  2015        PMID: 26114027      PMCID: PMC4473742          DOI: 10.1364/BOE.6.002036

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  33 in total

1.  Direct 4D reconstruction of parametric images incorporating anato-functional joint entropy.

Authors:  Jing Tang; Hiroto Kuwabara; Dean F Wong; Arman Rahmim
Journal:  Phys Med Biol       Date:  2010-07-20       Impact factor: 3.609

2.  Digimouse: a 3D whole body mouse atlas from CT and cryosection data.

Authors:  Belma Dogdas; David Stout; Arion F Chatziioannou; Richard M Leahy
Journal:  Phys Med Biol       Date:  2007-01-10       Impact factor: 3.609

3.  Wavelet-based data and solution compression for efficient image reconstruction in fluorescence diffuse optical tomography.

Authors:  Teresa Correia; Timothy Rudge; Maximilian Koch; Vasilis Ntziachristos; Simon Arridge
Journal:  J Biomed Opt       Date:  2013-08       Impact factor: 3.170

4.  Hybrid system for simultaneous fluorescence and x-ray computed tomography.

Authors:  Ralf B Schulz; Angelique Ale; Athanasios Sarantopoulos; Marcus Freyer; Eric Soehngen; Marta Zientkowska; Vasilis Ntziachristos
Journal:  IEEE Trans Med Imaging       Date:  2009-11-10       Impact factor: 10.048

5.  Dynamic contrast-enhanced optical imaging of in vivo organ function.

Authors:  Cyrus B Amoozegar; Tracy Wang; Matthew B Bouchard; Addason F H McCaslin; William S Blaner; Richard M Levenson; Elizabeth M C Hillman
Journal:  J Biomed Opt       Date:  2012-09       Impact factor: 3.170

6.  The pharmacokinetics of hyperpolarized xenon: implications for cerebral MRI.

Authors:  C C Martin; R F Williams; J H Gao; L D Nickerson; J Xiong; P T Fox
Journal:  J Magn Reson Imaging       Date:  1997 Sep-Oct       Impact factor: 4.813

7.  Pharmacokinetics of ICG and HPPH-car for the detection of normal and tumor tissue using fluorescence, near-infrared reflectance imaging: a case study.

Authors:  M Gurfinkel; A B Thompson; W Ralston; T L Troy; A L Moore; T A Moore; J D Gust; D Tatman; J S Reynolds; B Muggenburg; K Nikula; R Pandey; R H Mayer; D J Hawrysz; E M Sevick-Muraca
Journal:  Photochem Photobiol       Date:  2000-07       Impact factor: 3.421

8.  Time-dependent whole-body fluorescence tomography of probe bio-distributions in mice.

Authors:  Sachin Patwardhan; Sharon Bloch; Samuel Achilefu; Joseph Culver
Journal:  Opt Express       Date:  2005-04-04       Impact factor: 3.894

9.  Direct measurement of hepatic indocyanine green clearance with near-infrared spectroscopy: separate evaluation of uptake and removal.

Authors:  H Shinohara; A Tanaka; T Kitai; N Yanabu; T Inomoto; S Satoh; E Hatano; Y Yamaoka; K Hirao
Journal:  Hepatology       Date:  1996-01       Impact factor: 17.425

10.  In vivo quantification of optical contrast agent dynamics in rat tumors by use of diffuse optical spectroscopy with magnetic resonance imaging coregistration.

Authors:  David J Cuccia; Frederic Bevilacqua; Anthony J Durkin; Sean Merritt; Bruce J Tromberg; Gultekin Gulsen; Hon Yu; Jun Wang; Orhan Nalcioglu
Journal:  Appl Opt       Date:  2003-06-01       Impact factor: 1.980

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  3 in total

1.  Cone Beam X-ray Luminescence Computed Tomography Based on Bayesian Method.

Authors:  Guanglei Zhang; Fei Liu; Jie Liu; Jianwen Luo; Yaoqin Xie; Jing Bai; Lei Xing
Journal:  IEEE Trans Med Imaging       Date:  2016-08-26       Impact factor: 10.048

2.  A reconstruction approach in wavelet domain for fluorescent molecular tomography via rotated sources illumination.

Authors:  Wei Zou; Jiajun Wang; Danfeng Hu; Wenxia Wang
Journal:  Biomed Eng Online       Date:  2015-09-30       Impact factor: 2.819

3.  Primal-dual approach to optical tomography with discretized path integral with efficient formulations.

Authors:  Bingzhi Yuan; Toru Tamaki; Bisser Raytchev; Kazufumi Kaneda
Journal:  J Med Imaging (Bellingham)       Date:  2017-07-19
  3 in total

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