| Literature DB >> 26109530 |
Maud Lemoine1, Yusuke Shimakawa2, Shevanthi Nayagam3, Mustapha Khalil4, Penda Suso4, Jo Lloyd5, Robert Goldin5, Harr-Freeya Njai6, Gibril Ndow6, Makie Taal7, Graham Cooke8, Umberto D'Alessandro6, Muriel Vray9, Papa Saliou Mbaye10, Ramou Njie6, Vincent Mallet11, Mark Thursz3.
Abstract
BACKGROUND: Simple and inexpensive non-invasive fibrosis tests are highly needed but have been poorly studied in sub-Saharan Africa.Entities:
Keywords: FIBROSIS; HEPATITIS B
Mesh:
Substances:
Year: 2015 PMID: 26109530 PMCID: PMC4975834 DOI: 10.1136/gutjnl-2015-309260
Source DB: PubMed Journal: Gut ISSN: 0017-5749 Impact factor: 23.059
Figure 1Flow diagram of the study population and reasons for exclusion, from November 2011 to November 2013, The Gambia. CHB, chronic HBV; HCC, hepatocellular carcinoma; HDV, hepatitis D virus; LB, liver biopsy; TB, tuberculosis.
Baseline characteristics of the study population in training set (The Gambia) and in validation sets (France and Senegal)
| Variables | The Gambia (n=135) | France (n=63) | Senegal (n=80) | p Value |
|---|---|---|---|---|
| Male sex, n | 105 (78%) | 41 (65%) | 67 (84%) | 0.03 |
| Median age (years) (IQR) | 34 (29–39) | 38 (29–49) | 28 (24–31) | <0.001 |
| Median BMI (kg/m2) (IQR) | 21.6 (19.9–24.8) | Not reported | 20.9 (18.9–24.0) | 0.1 |
| Median fasting LSM value (kPa) | 7.5 (6.5–9.2) | Not reported | 8.8 (7.8–10.2) | <0.001 |
| Median IQR of LSM (kPa) | 1.3 (0.9–1.8) | Not reported | 1.4 (1.1–2.6) | 0.006 |
| Median ALT (IU/L) (IQR) | 30 (23–49) | 61 (39–125) | 39 (30–53) | <0.001 |
| Median AST (IU/L) (IQR) | 36 (29–48) | 36 (28–66) | 41 (31–53) | 0.4 |
| Median GGT (IU/L) (IQR) | 36 (24–59) | 32 (18–52) | 26 (22–42) | 0.002 |
| Median total bilirubin (IU/L) (IQR) | 11 (9–15) | 11 (8–14) | 12 (9–14) | 0.4 |
| Median platelet counts (109/L) (IQR) | 177 (136–226) | 171 (143–210) | 179 (156–210) | 0.5 |
| Negative HBeAg, n | 129 (96%) | 28 (60%) | 66 (83%) | <0.001 |
| Median HBV DNA level (log10 IU/mL) (IQR) | 2.6 (1.9–4.5) | 5.7 (4.4–7.1) | 3.9 (3.5–5.2) | <0.001 |
| Median APRI (IQR) | 0.52 (0.37–0.82) | 0.56 (0.31–1.01) | 0.55 (0.41–0.80) | 0.7 |
| Median Fib-4 (IQR) | 1.30 (0.86–1.84) | 1.09 (0.75–1.69) | 0.96 (0.74–1.32) | <0.001 |
| Median size of liver biopsy (mm) (IQR) | 11 (8–12) | 20 (17–25) | 28 (22–32) | <0.001 |
| Metavir fibrosis stage (F0/F1/F2/F3/F4) | 28 (21%)/54 (40%)/10 (7%)/ 23 (17%)/20 (15%) | 6 (10%)/27 (43%)/15 (24%)/ 11 (17%)/4 (6%) | 18 (23%)/36 (45%)/17 (21%)/ 9 (11%)/0 (0%) | <0.001 |
| Metavir activity grade (A0/A1/A2/A3) | 30 (22%)/68 (50%)/23 (17%)/14 (10%) | Not reported | 42 (53%)/29 (37%)/8 (10%)/0 (0%) | <0.001 |
| Steatosis (none/mild/moderate/severe) | 125 (93%)/6 (4%)/4 (3%)/0 (0%) | 30 (64%)/15 (32%)/2 (4%)/0 (0%) | 73 (91%)/7 (9%)/0 (0%)/0 (0%) | <0.001 |
ALT, alanine transaminase; APRI, (AST)-to-platelet ratio index; AST, aspartate transaminase; BMI, body mass index; HBeAg, hepatitis B e antigen; GGT, gamma-glutamyl transpeptidase; LSM, liver stiffness measurement.
Crude analysis for factors associated with the presence of significant fibrosis (F2–4) in the training set, in The Gambia
| Factors* | No or mild fibrosis | Significant | Crude p value† |
|---|---|---|---|
| Age (years) | 36±10 | 35±11 | 0.7 |
| Male sex, n (%) | 58 (71) | 47 (89) | 0.02 |
| AST (IU/L) | 39±22 | 62±61 | 0.01 |
| ALT (IU/L) | 37±25 | 64±79 | 0.007 |
| ALP (IU/L) | 97±44 | 112±69 | 0.1 |
| GGT (IU//L) | 35±21 | 72±55 | <0.001 |
| Albumin (g/L) | 43±4 | 41±11 | 0.003 |
| Total bilirubin (IU/L) | 12±5 | 17±21 | 0.1 |
| Platelets (109/L) | 201±67 | 185±183 | 0.007 |
| HBV DNA (log10IU/mL) | 6.9±7.8 | 8.5±9.3 | 0.01 |
*Continuous variables are presented as mean±SD.
† p Values were obtained using logarithmic transformed values except for sex.
ALT, alanine transaminase; ALP, alkaline phosphatase; AST, aspartate transaminase; GGT, gamma-glutamyl transpeptidase.
Figure 2Box plots of gamma-glutamyl transpeptidase (GGT) (A), platelet count (B), GGT to platelet ratio (GPR) (C), liver stiffness measurement (LSM) (D), aspartate transaminase-to-platelet ratio index (APRI) (E), and Fib-4 (F) according to the Metavir fibrosis stage in the Gambian cohort.
Diagnostic performances of GPR, Fibroscan, APRI and Fib-4 in the training set (The Gambia) and in validation sets (France and Senegal)*
| The Gambia (n=135) | France (n=63)† | Senegal (n=80)‡ | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| F0–1 vs F2–4 | F0–2 vs F3–4 | F0–3 vs F4 | F0–1 vs F2–4 | F0–2 vs F3–4 | F0–3 vs F4 | F0–1 vs F2–4 | F0–2 vs F3–4 | |||||||||
| GPR | ||||||||||||||||
| | ||||||||||||||||
| Cut-off values§ | 0.32 | 0.32 | 0.56 | 0.32 | 0.32 | 0.56 | 0.32 | 0.32 | ||||||||
| Sensitivity/specificity (%) | 83/69 | 86/64 | 85/76 | 73/49 | 80/44 | 100/68 | 50/83 | 89/80 | ||||||||
| Correctly classified (%) | 74 | 71 | 77 | 60 | 52 | 70 | 73 | 81 | ||||||||
| PPV/NPV (%) | 63/86 | 53/91 | 39/97 | 56/67 | 31/88 | 17/100 | 59/78 | 36/98 | ||||||||
| Positive/negative LR | 2.7/0.3 | 2.4/0.2 | 3.5/0.2 | 1.4/0.6 | 1.4/0.5 | 3.1/0.0 | 3.0/0.6 | 4.5/0.1 | ||||||||
| Fibroscan | ||||||||||||||||
| | ||||||||||||||||
| Cut-off values§ | 7.9 | 8.2 | 9.5 | 7.9 | 8.2 | |||||||||||
| Sensitivity/specificity (%) | 81/81 | 93/82 | 100/89 | 81/30 | 89/41 | |||||||||||
| Correctly classified (%) | 81 | 85 | 90 | 46 | 46 | |||||||||||
| PPV/NPV (%) | 73/87 | 70/96 | 61/100 | 36/76 | 16/97 | |||||||||||
| Positive/negative LR | 4.2/0.2 | 5.0/0.1 | 8.9/0 | 1.1/0.6 | 1.5/0.3 | |||||||||||
| APRI | ||||||||||||||||
| | ||||||||||||||||
| Cut-off values¶ | 0.5 | 1.5 | 1.0 | 2.0 | 0.5 | 1.5 | 1.0 | 2.0 | 0.5 | 1.5 | ||||||
| Sensitivity/specificity (%) | 64/64 | 9/98 | 40/87 | 25/99 | 77/67 | 20/91 | 50/78 | 25/92 | 42/70 | 0/96 | ||||||
| Correctly classified (%) | 64 | 62 | 80 | 88 | 71 | 57 | 76 | 87 | 61 | 65 | ||||||
| PPV/NPV (%) | 54/73 | 71/62 | 35/89 | 75/87 | 68/76 | 67/56 | 13/96 | 17/95 | 41/72 | 0/67 | ||||||
| Positive/negative LR | 1.8/0.6 | 3.8/0.9 | 3.0/0.7 | 28/0.8 | 2.3/0.4 | 2.2/0.9 | 2.3/0.6 | 3.0/0.8 | 1.4/0.8 | 0.0/1.0 | ||||||
| Indeterminate results (%) | 42 | 13 | 40 | 14 | 31 | |||||||||||
| Fib-4 | ||||||||||||||||
| | ||||||||||||||||
| Cut-off values** | 1.45 | 3.25 | 1.45 | 3.25 | 1.45 | 3.25 | ||||||||||
| Sensitivity/specificity (%) | 63/68 | 14/98 | 73/73 | 27/96 | 44/83 | 0/100 | ||||||||||
| Correctly classified (%) | 66 | 71 | 73 | 79 | 79 | 89 | ||||||||||
| PPV/NPV (%) | 48/79 | 75/70 | 46/90 | 67/81 | 25/92 | NA/89 | ||||||||||
| Positive/negative LR | 1.9/0.5 | 6.3/0.9 | 2.7/0.4 | 6.4/0.8 | 2.6/0.7 | 1.0/NA | ||||||||||
| Indeterminate results (%) | 36 | 29 | 20 | |||||||||||||
| Comparison of AUROC | ||||||||||||||||
| GPR and Fibroscan | p=0.2 | p=0.02 | p=0.003 | N/A | N/A | N/A | p=0.2 | p=0.04 | ||||||||
| GPR and APRI | p<0.001 | p=0.002 | p=0.03 | p=0.4 | p=0.2 | p=0.3 | p=0.05 | P=0.3 | ||||||||
| GPR and Fib-4 | p=0.003 | p=0.01 | p=0.03 | p=0.6 | p=0.1 | p=0.6 | p=0.04 | P=0.02 | ||||||||
| Fibroscan and APRI | p<0.001 | p<0.001 | p<0.001 | N/A | N/A | N/A | p=0.9 | p=0.1 | ||||||||
| Fibroscan and Fib-4 | p<0.001 | p<0.001 | p<0.001 | N/A | N/A | N/A | p=0.6 | p=0.9 | ||||||||
| APRI and Fib-4 | p=0.9 | p=0.9 | p=0.6 | p=0.6 | p=0.6 | p=0.6 | p=0.4 | p=0.03 | ||||||||
*The cut-off values for GGT were 58 in The Gambia, 45 in men and 30 in women in France, and 73 in men and 43 in women in Senegal. The cut-off values for AST were 46 in men and 25 in women in The Gambia, 45 in men and 40 in women in France, and 59 in men and 36 in women in Senegal.
†In France, Fibroscan was not performed.
‡In Senegal, there was no patient with cirrhosis (F4).
§Cut-off values for GPR and Fibroscan were determined to maximise the sum of sensitivity and specificity in the training data set.
¶Predetermined cut-off values of APRI were used (0.5 and 1.5 to distinguish significant fibrosis, and 1.0 and 2.0 to distinguish cirrhosis).
**Predetermined cut-off values of Fib-4 were used (1.45 and 3.25 to distinguish extensive fibrosis).
APRI, AST-to-platelet ratio index AST; aspartate transaminase; AUROC, area under the receiver operating characteristic curve; GGT, gamma-glutamyl transpeptidase; GPR, gamma-glutamyl transpeptidase to platelet ratio; LR, likelihood ratio; NA, not applicable; NPV, negative predictive value; PPV, positive predictive value.