Literature DB >> 26104690

The Ty1 LTR-Retrotransposon of Budding Yeast, Saccharomyces cerevisiae.

M Joan Curcio, Sheila Lutz, Pascale Lesage.   

Abstract

Long-terminal repeat (LTR)-retrotransposons generate a copy of their DNA (cDNA) by reverse transcription of their RNA genome in cytoplasmic nucleocapsids. They are widespread in the eukaryotic kingdom and are the evolutionary progenitors of retroviruses. The Ty1 element of the budding yeast Saccharomyces cerevisiae was the first LTR-retrotransposon demonstrated to mobilize through an RNA intermediate, and not surprisingly, is the best studied. The depth of our knowledge of Ty1 biology stems not only from the predominance of active Ty1 elements in the S. cerevisiae genome but also the ease and breadth of genomic, biochemical, and cell biology approaches available to study cellular processes in yeast. This review describes the basic structure of Ty1 and its gene products, the replication cycle, the rapidly expanding compendium of host cofactors known to influence retrotransposition, and the nature of Ty1's elaborate symbiosis with its host. Our goal is to illuminate the value of Ty1 as a paradigm to explore the biology of LTR-retrotransposons in multicellular organisms, where the low frequency of retrotransposition events presents a formidable barrier to investigations of retrotransposon biology.

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Year:  2015        PMID: 26104690     DOI: 10.1128/microbiolspec.MDNA3-0053-2014

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  19 in total

Review 1.  Repetitive DNA loci and their modulation by the non-canonical nucleic acid structures R-loops and G-quadruplexes.

Authors:  Amanda C Hall; Lauren A Ostrowski; Violena Pietrobon; Karim Mekhail
Journal:  Nucleus       Date:  2017-03-04       Impact factor: 4.197

Review 2.  Integration site selection by retroviruses and transposable elements in eukaryotes.

Authors:  Tania Sultana; Alessia Zamborlini; Gael Cristofari; Pascale Lesage
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

3.  Ty1 escapes restriction by the self-encoded factor p22 through mutations in capsid.

Authors:  Jessica M Tucker; David J Garfinkel
Journal:  Mob Genet Elements       Date:  2016-03-07

4.  Saccharomyces cerevisiae RNA lariat debranching enzyme, Dbr1p, is required for completion of reverse transcription by the retrovirus-like element Ty1 and cleaves branched Ty1 RNAs.

Authors:  Thomas M Menees
Journal:  Mol Genet Genomics       Date:  2021-01-19       Impact factor: 3.291

5.  Long Terminal Repeat Retrotransposon Afut4 Promotes Azole Resistance of Aspergillus fumigatus by Enhancing the Expression of sac1 Gene.

Authors:  Mandong Hu; Zongwei Li; Dingchen Li; Jingya Zhao; Yong Chen; Zelei Wang; Fangyan Chen; Li Han
Journal:  Antimicrob Agents Chemother       Date:  2021-09-13       Impact factor: 5.191

6.  Long-read sequencing of the zebrafish genome reorganizes genomic architecture.

Authors:  Yelena Chernyavskaya; Xiaofei Zhang; Jinze Liu; Jessica Blackburn
Journal:  BMC Genomics       Date:  2022-02-10       Impact factor: 4.547

Review 7.  Retroviral DNA Integration.

Authors:  Paul Lesbats; Alan N Engelman; Peter Cherepanov
Journal:  Chem Rev       Date:  2016-05-20       Impact factor: 60.622

8.  Sequence Assembly of Yarrowia lipolytica Strain W29/CLIB89 Shows Transposable Element Diversity.

Authors:  Christophe Magnan; James Yu; Ivan Chang; Ethan Jahn; Yuzo Kanomata; Jenny Wu; Michael Zeller; Melanie Oakes; Pierre Baldi; Suzanne Sandmeyer
Journal:  PLoS One       Date:  2016-09-07       Impact factor: 3.240

9.  Structure-Function Model for Kissing Loop Interactions That Initiate Dimerization of Ty1 RNA.

Authors:  Eric R Gamache; Jung H Doh; Justin Ritz; Alain Laederach; Stanislav Bellaousov; David H Mathews; M Joan Curcio
Journal:  Viruses       Date:  2017-04-26       Impact factor: 5.048

Review 10.  Retrotransposon targeting to RNA polymerase III-transcribed genes.

Authors:  Stephanie Cheung; Savrina Manhas; Vivien Measday
Journal:  Mob DNA       Date:  2018-04-23
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