Literature DB >> 26093545

Simplified TiO2 force fields for studies of its interaction with biomolecules.

Binquan Luan1, Tien Huynh1, Ruhong Zhou1.   

Abstract

Engineered TiO2 nanoparticles have been routinely applied in nanotechnology, as well as in cosmetics and food industries. Despite active experimental studies intended to clarify TiO2's biological effects, including potential toxicity, the relation between experimentally inferred nanotoxicity and industry standards for safely applying nanoparticles remains somewhat ambiguous with justified concerns. Supplemental to experiments, molecular dynamics simulations have proven to be efficacious in investigating the molecular mechanism of a biological process occurring at nanoscale. In this article, to facilitate the nanotoxicity and nanomedicine research related to this important metal oxide, we provide a simplified force field, based on the original Matsui-Akaogi force field but compatible to the Lennard-Jones potentials normally used in modeling biomolecules, for simulating TiO2 nanoparticles interacting with biomolecules. The force field parameters were tested in simulating the bulk structure of TiO2, TiO2 nanoparticle-water interaction, as well as the adsorption of proteins on the TiO2 nanoparticle. We demonstrate that these simulation results are consistent with experimental data/observations. We expect that simulations will help to better understand the interaction between TiO2 and molecules.

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Year:  2015        PMID: 26093545     DOI: 10.1063/1.4922618

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  7 in total

1.  An In Silico study of TiO2 nanoparticles interaction with twenty standard amino acids in aqueous solution.

Authors:  Shengtang Liu; Xuan-Yu Meng; Jose Manuel Perez-Aguilar; Ruhong Zhou
Journal:  Sci Rep       Date:  2016-11-24       Impact factor: 4.379

2.  Curved TiO2 Nanoparticles in Water: Short (Chemical) and Long (Physical) Range Interfacial Effects.

Authors:  Gianluca Fazio; Daniele Selli; Lorenzo Ferraro; Gotthard Seifert; Cristiana Di Valentin
Journal:  ACS Appl Mater Interfaces       Date:  2018-07-09       Impact factor: 9.229

3.  Optimizing PEGylation of TiO2 Nanocrystals through a Combined Experimental and Computational Study.

Authors:  Daniele Selli; Massimo Tawfilas; Michele Mauri; Roberto Simonutti; Cristiana Di Valentin
Journal:  Chem Mater       Date:  2019-08-09       Impact factor: 9.811

4.  Dopamine-Decorated TiO2 Nanoparticles in Water: A QM/MM vs an MM Description.

Authors:  Paulo Siani; Stefano Motta; Lorenzo Ferraro; Asmus O Dohn; Cristiana Di Valentin
Journal:  J Chem Theory Comput       Date:  2020-09-17       Impact factor: 6.006

5.  The role of size and nature in nanoparticle binding to a model lung membrane: an atomistic study.

Authors:  Ankush Singhal; G J Agur Sevink
Journal:  Nanoscale Adv       Date:  2021-09-22

6.  TETT-functionalized TiO2 nanoparticles for DOX loading: a quantum mechanical study at the atomic scale.

Authors:  Martina Datteo; Lorenzo Ferraro; Gotthard Seifert; Cristiana Di Valentin
Journal:  Nanoscale Adv       Date:  2020-05-15

7.  Interaction of KRSR Peptide with Titanium Dioxide Anatase (100) Surface: A Molecular Dynamics Simulation Study.

Authors:  Tamás Tarjányi; Ferenc Bogár; Janos Minarovits; Márió Gajdács; Zsolt Tóth
Journal:  Int J Mol Sci       Date:  2021-12-09       Impact factor: 5.923

  7 in total

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