Literature DB >> 26092463

New Insight into Microbial Iron Oxidation as Revealed by the Proteomic Profile of an Obligate Iron-Oxidizing Chemolithoautotroph.

Roman A Barco1, David Emerson2, Jason B Sylvan3, Beth N Orcutt2, Myrna E Jacobson Meyers3, Gustavo A Ramírez3, John D Zhong3, Katrina J Edwards3.   

Abstract

Microaerophilic, neutrophilic, iron-oxidizing bacteria (FeOB) grow via the oxidation of reduced Fe(II) at or near neutral pH, in the presence of oxygen, making them relevant in numerous environments with elevated Fe(II) concentrations. However, the biochemical mechanisms for Fe(II) oxidation by these neutrophilic FeOB are unknown, and genetic markers for this process are unavailable. In the ocean, microaerophilic microorganisms in the genus Mariprofundus of the class Zetaproteobacteria are the only organisms known to chemolithoautotrophically oxidize Fe and concurrently biomineralize it in the form of twisted stalks of iron oxyhydroxides. The aim of this study was to identify highly expressed proteins associated with the electron transport chain of microaerophilic, neutrophilic FeOB. To this end, Mariprofundus ferrooxydans PV-1 was cultivated, and its proteins were extracted, assayed for redox activity, and analyzed via liquid chromatography-tandem mass spectrometry for identification of peptides. The results indicate that a cytochrome c4, cbb3-type cytochrome oxidase subunits, and an outer membrane cytochrome c were among the most highly expressed proteins and suggest an involvement in the process of aerobic, neutrophilic bacterial Fe oxidation. Proteins associated with alternative complex III, phosphate transport, carbon fixation, and biofilm formation were abundant, consistent with the lifestyle of Mariprofundus.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26092463      PMCID: PMC4551237          DOI: 10.1128/AEM.01374-15

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  55 in total

1.  New class of bacterial membrane oxidoreductases.

Authors:  Mikhail F Yanyushin; Melissa C del Rosario; Daniel C Brune; Robert E Blankenship
Journal:  Biochemistry       Date:  2005-08-02       Impact factor: 3.162

2.  Microbial communities in iron-silica-rich microbial mats at deep-sea hydrothermal fields of the Southern Mariana Trough.

Authors:  Shingo Kato; Chiyori Kobayashi; Takeshi Kakegawa; Akihiko Yamagishi
Journal:  Environ Microbiol       Date:  2009-04-22       Impact factor: 5.491

Review 3.  Genomic insights into microbial iron oxidation and iron uptake strategies in extremely acidic environments.

Authors:  Violaine Bonnefoy; David S Holmes
Journal:  Environ Microbiol       Date:  2011-11-03       Impact factor: 5.491

4.  Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition.

Authors:  David Emerson; Craig L Moyer
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

5.  Biodiversity and emerging biogeography of the neutrophilic iron-oxidizing Zetaproteobacteria.

Authors:  Sean M McAllister; Richard E Davis; Joyce M McBeth; Bradley M Tebo; David Emerson; Craig L Moyer
Journal:  Appl Environ Microbiol       Date:  2011-06-10       Impact factor: 4.792

6.  Enzymatic characterization and in vivo function of five terminal oxidases in Pseudomonas aeruginosa.

Authors:  Hiroyuki Arai; Takuro Kawakami; Tatsuya Osamura; Takehiro Hirai; Yoshiaki Sakai; Masaharu Ishii
Journal:  J Bacteriol       Date:  2014-09-02       Impact factor: 3.490

7.  Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation.

Authors:  Clara S Chan; Sirine C Fakra; David Emerson; Emily J Fleming; Katrina J Edwards
Journal:  ISME J       Date:  2010-11-25       Impact factor: 10.302

8.  Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing, chemolithoautotrophic alpha- and gamma-proteobacteria from the deep sea.

Authors:  K J Edwards; D R Rogers; C O Wirsen; T M McCollom
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

9.  Carbon adsorption onto Fe oxyhydroxide stalks produced by a lithotrophic iron-oxidizing bacteria.

Authors:  S A Bennett; B M Toner; R Barco; K J Edwards
Journal:  Geobiology       Date:  2014-01-16       Impact factor: 4.407

10.  InterProScan: protein domains identifier.

Authors:  E Quevillon; V Silventoinen; S Pillai; N Harte; N Mulder; R Apweiler; R Lopez
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

View more
  57 in total

Review 1.  Microbial Surface Colonization and Biofilm Development in Marine Environments.

Authors:  Hongyue Dang; Charles R Lovell
Journal:  Microbiol Mol Biol Rev       Date:  2015-12-23       Impact factor: 11.056

2.  Peeking under the Iron Curtain: Development of a Microcosm for Imaging the Colonization of Steel Surfaces by Mariprofundus sp. Strain DIS-1, an Oxygen-Tolerant Fe-Oxidizing Bacterium.

Authors:  Adam C Mumford; Irini J Adaktylou; David Emerson
Journal:  Appl Environ Microbiol       Date:  2016-10-27       Impact factor: 4.792

Review 3.  An evolving view on biogeochemical cycling of iron.

Authors:  Andreas Kappler; Casey Bryce; Muammar Mansor; Ulf Lueder; James M Byrne; Elizabeth D Swanner
Journal:  Nat Rev Microbiol       Date:  2021-02-01       Impact factor: 60.633

Review 4.  Extracellular electron uptake by autotrophic microbes: physiological, ecological, and evolutionary implications.

Authors:  Dinesh Gupta; Michael S Guzman; Arpita Bose
Journal:  J Ind Microbiol Biotechnol       Date:  2020-09-15       Impact factor: 3.346

5.  Microbial chemolithotrophy mediates oxidative weathering of granitic bedrock.

Authors:  Stephanie A Napieralski; Heather L Buss; Susan L Brantley; Seungyeol Lee; Huifang Xu; Eric E Roden
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-16       Impact factor: 11.205

Review 6.  A physiological perspective on the origin and evolution of photosynthesis.

Authors:  William F Martin; Donald A Bryant; J Thomas Beatty
Journal:  FEMS Microbiol Rev       Date:  2018-03-01       Impact factor: 16.408

7.  Genomic Insights into Two Novel Fe(II)-Oxidizing Zetaproteobacteria Isolates Reveal Lifestyle Adaption to Coastal Marine Sediments.

Authors:  Nia Blackwell; Casey Bryce; Daniel Straub; Andreas Kappler; Sara Kleindienst
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

8.  Environmental Evidence for and Genomic Insight into the Preference of Iron-Oxidizing Bacteria for More-Corrosion-Resistant Stainless Steel at Higher Salinities.

Authors:  Cody E Garrison; Kyra A Price; Erin K Field
Journal:  Appl Environ Microbiol       Date:  2019-07-01       Impact factor: 4.792

9.  Metagenomic Analyses of the Autotrophic Fe(II)-Oxidizing, Nitrate-Reducing Enrichment Culture KS.

Authors:  Shaomei He; Claudia Tominski; Andreas Kappler; Sebastian Behrens; Eric E Roden
Journal:  Appl Environ Microbiol       Date:  2016-04-18       Impact factor: 4.792

10.  Electron Accepting Units of the Diheme Cytochrome c TsdA, a Bifunctional Thiosulfate Dehydrogenase/Tetrathionate Reductase.

Authors:  Julia M Kurth; José A Brito; Jula Reuter; Alexander Flegler; Tobias Koch; Thomas Franke; Eva-Maria Klein; Sam F Rowe; Julea N Butt; Kevin Denkmann; Inês A C Pereira; Margarida Archer; Christiane Dahl
Journal:  J Biol Chem       Date:  2016-09-30       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.