| Literature DB >> 26090212 |
Rahhal El Ajlaoui1, El Mostapha Rakib1, Souad Mojahidi1, Mohamed Saadi2, Lahcen El Ammari2.
Abstract
Mol-ecules of the title compound, C11H9NOS3, are built up by one thio-phene and one 2-thioxa-thia-zolidin-4-one ring which are connected by a methyl-ene bridge. In addition, there is an allyl substituent attached to nitro-gen. The two rings are almost coplanar, making a dihedral angle between them of 0.76 (11)°. The allyl group is oriented perpendicular to the mean plane through both ring systems. The crystal structure exhibits inversion dimers in which mol-ecules are linked by pairs of C-H⋯O hydrogen bonds. Additional π-π inter-actions between neighboring thio-phene and 2-thioxa-thia-zolidin-4-one rings [inter-centroid distance = 3.694 (2) Å] lead to the formation of a three-dimensional network.Entities:
Keywords: 2-thioxathiazolidin-4-one; crystal structure; hydrogen bonding; rhodanine derivative; π–π interactions
Year: 2015 PMID: 26090212 PMCID: PMC4459307 DOI: 10.1107/S2056989015010166
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C11H9NOS3 | |
| Triclinic, | |
| Mo | |
| Cell parameters from 3514 reflections | |
| θ = 3.0–30.0° | |
| α = 79.386 (2)° | µ = 0.59 mm−1 |
| β = 80.104 (2)° | |
| γ = 68.908 (1)° | Block, yellow |
| 0.37 × 0.35 × 0.28 mm |
| Bruker X8 APEX diffractometer | 3514 independent reflections |
| Radiation source: fine-focus sealed tube | 2557 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 30.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 25223 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3514 reflections | Δρmax = 0.35 e Å−3 |
| 145 parameters | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.1345 (4) | 0.1860 (4) | 0.70306 (19) | 0.0518 (6) | |
| H1 | −0.0046 | 0.2033 | 0.7342 | 0.062* | |
| C2 | 0.3105 (4) | 0.0861 (4) | 0.75114 (18) | 0.0523 (6) | |
| H2 | 0.3058 | 0.0267 | 0.8192 | 0.063* | |
| C3 | 0.5018 (4) | 0.0808 (3) | 0.68783 (17) | 0.0428 (5) | |
| H3 | 0.6372 | 0.0182 | 0.7094 | 0.051* | |
| C4 | 0.4669 (3) | 0.1785 (3) | 0.59025 (16) | 0.0350 (4) | |
| C5 | 0.6327 (3) | 0.1940 (3) | 0.50925 (16) | 0.0358 (4) | |
| H5 | 0.7718 | 0.1321 | 0.5264 | 0.043* | |
| C6 | 0.6167 (3) | 0.2849 (3) | 0.41203 (16) | 0.0341 (4) | |
| C7 | 0.8086 (3) | 0.2828 (3) | 0.33909 (16) | 0.0366 (4) | |
| C8 | 0.5339 (3) | 0.4692 (3) | 0.23605 (17) | 0.0399 (5) | |
| C9 | 0.9117 (4) | 0.4146 (4) | 0.15934 (19) | 0.0491 (6) | |
| H9A | 0.8550 | 0.5408 | 0.1181 | 0.059* | |
| H9B | 1.0355 | 0.4141 | 0.1876 | 0.059* | |
| C10 | 0.9801 (6) | 0.2599 (5) | 0.0927 (2) | 0.0743 (9) | |
| H10 | 0.8740 | 0.2392 | 0.0646 | 0.089* | |
| C11 | 1.1737 (7) | 0.1513 (6) | 0.0701 (3) | 0.1111 (16) | |
| H11A | 1.2845 | 0.1674 | 0.0967 | 0.133* | |
| H11B | 1.2038 | 0.0562 | 0.0272 | 0.133* | |
| N1 | 0.7483 (3) | 0.3913 (3) | 0.24437 (13) | 0.0382 (4) | |
| O1 | 0.9933 (2) | 0.2023 (3) | 0.35541 (13) | 0.0515 (4) | |
| S1 | 0.19548 (9) | 0.27676 (9) | 0.57905 (5) | 0.04606 (16) | |
| S2 | 0.38596 (8) | 0.41472 (8) | 0.35129 (4) | 0.03895 (14) | |
| S3 | 0.41977 (12) | 0.59688 (12) | 0.13403 (5) | 0.0646 (2) |
| C1 | 0.0437 (13) | 0.0519 (14) | 0.0552 (15) | −0.0171 (11) | 0.0135 (11) | −0.0117 (11) |
| C2 | 0.0583 (15) | 0.0566 (14) | 0.0374 (12) | −0.0213 (12) | 0.0061 (11) | −0.0020 (10) |
| C3 | 0.0425 (12) | 0.0437 (12) | 0.0389 (11) | −0.0123 (10) | −0.0042 (9) | −0.0028 (9) |
| C4 | 0.0343 (10) | 0.0315 (10) | 0.0392 (11) | −0.0108 (8) | −0.0029 (8) | −0.0065 (8) |
| C5 | 0.0316 (10) | 0.0343 (10) | 0.0406 (11) | −0.0101 (8) | −0.0032 (8) | −0.0054 (8) |
| C6 | 0.0304 (9) | 0.0340 (10) | 0.0377 (10) | −0.0111 (8) | −0.0022 (8) | −0.0060 (8) |
| C7 | 0.0337 (10) | 0.0393 (11) | 0.0389 (11) | −0.0156 (9) | −0.0002 (8) | −0.0077 (9) |
| C8 | 0.0402 (11) | 0.0412 (11) | 0.0394 (11) | −0.0151 (9) | −0.0030 (9) | −0.0063 (9) |
| C9 | 0.0447 (13) | 0.0555 (14) | 0.0469 (13) | −0.0242 (11) | 0.0066 (10) | −0.0024 (10) |
| C10 | 0.084 (2) | 0.086 (2) | 0.0568 (17) | −0.0438 (19) | 0.0266 (15) | −0.0216 (15) |
| C11 | 0.133 (4) | 0.086 (3) | 0.067 (2) | 0.002 (2) | 0.025 (2) | −0.0083 (19) |
| N1 | 0.0360 (9) | 0.0424 (9) | 0.0370 (9) | −0.0165 (8) | 0.0006 (7) | −0.0051 (7) |
| O1 | 0.0298 (8) | 0.0662 (11) | 0.0532 (10) | −0.0130 (7) | −0.0035 (7) | −0.0032 (8) |
| S1 | 0.0340 (3) | 0.0453 (3) | 0.0515 (3) | −0.0083 (2) | −0.0008 (2) | −0.0031 (2) |
| S2 | 0.0291 (2) | 0.0432 (3) | 0.0410 (3) | −0.0101 (2) | −0.0029 (2) | −0.0024 (2) |
| S3 | 0.0557 (4) | 0.0842 (5) | 0.0448 (4) | −0.0184 (4) | −0.0133 (3) | 0.0101 (3) |
| C1—C2 | 1.347 (4) | C7—O1 | 1.208 (2) |
| C1—S1 | 1.701 (3) | C7—N1 | 1.400 (3) |
| C1—H1 | 0.9300 | C8—N1 | 1.364 (3) |
| C2—C3 | 1.405 (3) | C8—S3 | 1.638 (2) |
| C2—H2 | 0.9300 | C8—S2 | 1.743 (2) |
| C3—C4 | 1.377 (3) | C9—C10 | 1.468 (4) |
| C3—H3 | 0.9300 | C9—N1 | 1.468 (3) |
| C4—C5 | 1.433 (3) | C9—H9A | 0.9700 |
| C4—S1 | 1.729 (2) | C9—H9B | 0.9700 |
| C5—C6 | 1.344 (3) | C10—C11 | 1.278 (5) |
| C5—H5 | 0.9300 | C10—H10 | 0.9300 |
| C6—C7 | 1.473 (3) | C11—H11A | 0.9300 |
| C6—S2 | 1.749 (2) | C11—H11B | 0.9300 |
| C2—C1—S1 | 112.36 (18) | N1—C8—S3 | 126.87 (17) |
| C2—C1—H1 | 123.8 | N1—C8—S2 | 110.96 (16) |
| S1—C1—H1 | 123.8 | S3—C8—S2 | 122.17 (13) |
| C1—C2—C3 | 113.0 (2) | C10—C9—N1 | 113.0 (2) |
| C1—C2—H2 | 123.5 | C10—C9—H9A | 109.0 |
| C3—C2—H2 | 123.5 | N1—C9—H9A | 109.0 |
| C4—C3—C2 | 112.6 (2) | C10—C9—H9B | 109.0 |
| C4—C3—H3 | 123.7 | N1—C9—H9B | 109.0 |
| C2—C3—H3 | 123.7 | H9A—C9—H9B | 107.8 |
| C3—C4—C5 | 124.61 (19) | C11—C10—C9 | 125.3 (4) |
| C3—C4—S1 | 110.43 (16) | C11—C10—H10 | 117.4 |
| C5—C4—S1 | 124.96 (16) | C9—C10—H10 | 117.4 |
| C6—C5—C4 | 129.47 (19) | C10—C11—H11A | 120.0 |
| C6—C5—H5 | 115.3 | C10—C11—H11B | 120.0 |
| C4—C5—H5 | 115.3 | H11A—C11—H11B | 120.0 |
| C5—C6—C7 | 121.35 (19) | C8—N1—C7 | 116.63 (17) |
| C5—C6—S2 | 128.78 (16) | C8—N1—C9 | 122.99 (19) |
| C7—C6—S2 | 109.86 (15) | C7—N1—C9 | 120.37 (18) |
| O1—C7—N1 | 123.06 (19) | C1—S1—C4 | 91.64 (11) |
| O1—C7—C6 | 126.9 (2) | C8—S2—C6 | 92.49 (10) |
| N1—C7—C6 | 110.02 (17) |
| H··· | ||||
| C3—H3···O1i | 0.93 | 2.54 | 3.304 (3) | 140 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| C3H3O1i | 0.93 | 2.54 | 3.304(3) | 140 |
Symmetry code: (i) .