| Literature DB >> 26090202 |
Gamal A El-Hiti1, Keith Smith2, Amany S Hegazy2, Saud A Alanazi1, Benson M Kariuki2.
Abstract
There are two mol-ecules in the asymmetric unit of the title compound, C11H16N2O. The pyridine rings and amide groups overlap almost perfectly (r.m.s. overlay fit = 0.053 Å), but the tertiary butyl groups have different orientations: in one mol-ecule, one of the methyl C atoms is syn to the amide O atom [O-C-C-C = -0.8 (3)°] and in the other the equivalent torsion angle is 31.0 (2)°. In the crystal, the two independent mol-ecules are linked by a pair of N-H⋯N hydrogen bonds in the form of an R 2 (2)(8) loop to form a dimer. A C-H⋯O inter-action connects the dimers into [100] chains.Entities:
Keywords: crystal structure; hydrogen bonding; propanamide
Year: 2015 PMID: 26090202 PMCID: PMC4459364 DOI: 10.1107/S2056989015009378
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C11H16N2O | |
| Monoclinic, | Cu |
| Cell parameters from 3890 reflections | |
| θ = 3.9–73.6° | |
| µ = 0.57 mm−1 | |
| β = 94.549 (2)° | |
| Plate, colourless | |
| 0.47 × 0.33 × 0.11 mm |
| Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer | 4503 independent reflections |
| Radiation source: sealed X-ray tube, SuperNova (Cu) X-ray Source | 3684 reflections with |
| Mirror monochromator | |
| ω scans | θmax = 74.0°, θmin = 3.7° |
| Absorption correction: gaussian ( | |
| 8391 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.27 e Å−3 | |
| 4503 reflections | Δρmin = −0.21 e Å−3 |
| 262 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.0075 (6) |
| Experimental. Absorption correction: CrysAlisPro, Agilent Technologies, Version 1.171.37.33 (release 27-03-2014 CrysAlis171 .NET) (compiled Mar 27 2014,17:12:48) Numerical absorption correction based on gaussian integration over a multifaceted crystal model Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.20122 (11) | 0.54209 (16) | 0.13526 (5) | 0.0525 (3) | |
| C2 | 0.19343 (14) | 0.77138 (18) | 0.08875 (7) | 0.0650 (4) | |
| H2 | 0.1480 | 0.8535 | 0.0736 | 0.097* | |
| C3 | 0.31560 (14) | 0.77581 (19) | 0.08401 (7) | 0.0670 (4) | |
| C4 | 0.38057 (13) | 0.6528 (2) | 0.10739 (7) | 0.0701 (4) | |
| H4 | 0.4632 | 0.6499 | 0.1055 | 0.105* | |
| C5 | 0.32450 (12) | 0.5351 (2) | 0.13327 (7) | 0.0654 (4) | |
| H5 | 0.3681 | 0.4524 | 0.1492 | 0.098* | |
| C6 | 0.3730 (2) | 0.9087 (3) | 0.05543 (12) | 0.1036 (7) | |
| H6A | 0.4566 | 0.9132 | 0.0677 | 0.155* | |
| H6B | 0.3349 | 1.0037 | 0.0649 | 0.155* | |
| H6C | 0.3639 | 0.8939 | 0.0155 | 0.155* | |
| C7 | 0.15945 (14) | 0.27433 (18) | 0.16115 (6) | 0.0618 (4) | |
| C8 | 0.07563 (15) | 0.16852 (19) | 0.19135 (7) | 0.0689 (4) | |
| C9 | 0.1450 (2) | 0.0226 (2) | 0.21008 (9) | 0.0942 (6) | |
| H9A | 0.1777 | −0.0243 | 0.1782 | 0.141* | |
| H9B | 0.0920 | −0.0490 | 0.2263 | 0.141* | |
| H9C | 0.2090 | 0.0496 | 0.2375 | 0.141* | |
| C10 | 0.0273 (2) | 0.2443 (2) | 0.24272 (9) | 0.0918 (6) | |
| H10A | −0.0163 | 0.1692 | 0.2626 | 0.138* | |
| H10B | −0.0250 | 0.3280 | 0.2309 | 0.138* | |
| H10C | 0.0929 | 0.2832 | 0.2670 | 0.138* | |
| C11 | −0.0263 (2) | 0.1254 (3) | 0.14762 (12) | 0.1106 (8) | |
| H11A | 0.0066 | 0.0838 | 0.1149 | 0.166* | |
| H11B | −0.0726 | 0.2160 | 0.1374 | 0.166* | |
| H11C | −0.0768 | 0.0494 | 0.1631 | 0.166* | |
| C12 | −0.12246 (11) | 0.71207 (16) | 0.19991 (6) | 0.0520 (3) | |
| C13 | −0.02137 (14) | 0.65237 (19) | 0.28397 (6) | 0.0650 (4) | |
| H13 | 0.0409 | 0.5995 | 0.3037 | 0.098* | |
| C14 | −0.09434 (14) | 0.74294 (19) | 0.31429 (6) | 0.0634 (4) | |
| C15 | −0.18413 (15) | 0.8222 (2) | 0.28376 (7) | 0.0710 (4) | |
| H15 | −0.2350 | 0.8861 | 0.3023 | 0.106* | |
| C16 | −0.19970 (14) | 0.8082 (2) | 0.22610 (7) | 0.0660 (4) | |
| H16 | −0.2603 | 0.8618 | 0.2054 | 0.099* | |
| C17 | −0.0774 (2) | 0.7526 (3) | 0.37741 (7) | 0.0909 (6) | |
| H17A | −0.0997 | 0.8538 | 0.3894 | 0.136* | |
| H17B | 0.0051 | 0.7335 | 0.3895 | 0.136* | |
| H17C | −0.1268 | 0.6765 | 0.3936 | 0.136* | |
| C18 | −0.22818 (13) | 0.6925 (2) | 0.10586 (6) | 0.0671 (4) | |
| C19 | −0.21118 (14) | 0.6626 (2) | 0.04398 (6) | 0.0714 (4) | |
| C20 | −0.1518 (2) | 0.5048 (3) | 0.03776 (9) | 0.1036 (7) | |
| H20A | −0.0736 | 0.5054 | 0.0575 | 0.155* | |
| H20B | −0.1445 | 0.4838 | −0.0013 | 0.155* | |
| H20C | −0.1999 | 0.4260 | 0.0532 | 0.155* | |
| C21 | −0.1325 (2) | 0.7892 (3) | 0.02172 (9) | 0.1074 (8) | |
| H21A | −0.1659 | 0.8887 | 0.0293 | 0.161* | |
| H21B | −0.1291 | 0.7767 | −0.0181 | 0.161* | |
| H21C | −0.0532 | 0.7819 | 0.0400 | 0.161* | |
| C22 | −0.33408 (17) | 0.6641 (3) | 0.01113 (8) | 0.0955 (7) | |
| H22A | −0.3810 | 0.5790 | 0.0230 | 0.143* | |
| H22B | −0.3242 | 0.6546 | −0.0283 | 0.143* | |
| H22C | −0.3742 | 0.7596 | 0.0180 | 0.143* | |
| N1 | 0.13561 (10) | 0.65829 (14) | 0.11338 (5) | 0.0578 (3) | |
| N2 | 0.13689 (10) | 0.42840 (14) | 0.16285 (5) | 0.0577 (3) | |
| H2A | 0.0795 | 0.4589 | 0.1821 | 0.086* | |
| N3 | −0.03374 (10) | 0.63507 (14) | 0.22795 (5) | 0.0589 (3) | |
| N4 | −0.12739 (10) | 0.69100 (15) | 0.14133 (5) | 0.0585 (3) | |
| H4A | −0.0606 | 0.6758 | 0.1267 | 0.088* | |
| O1 | 0.23876 (14) | 0.22212 (15) | 0.13479 (7) | 0.0942 (4) | |
| O2 | −0.32545 (10) | 0.7145 (3) | 0.12290 (6) | 0.1234 (7) |
| C1 | 0.0471 (6) | 0.0604 (7) | 0.0506 (6) | −0.0005 (5) | 0.0069 (5) | −0.0061 (5) |
| C2 | 0.0609 (8) | 0.0606 (8) | 0.0750 (9) | 0.0020 (6) | 0.0152 (7) | 0.0019 (7) |
| C3 | 0.0619 (8) | 0.0670 (9) | 0.0739 (9) | −0.0103 (7) | 0.0180 (7) | −0.0082 (7) |
| C4 | 0.0458 (7) | 0.0872 (11) | 0.0783 (10) | −0.0058 (7) | 0.0111 (6) | −0.0054 (8) |
| C5 | 0.0476 (7) | 0.0792 (10) | 0.0695 (9) | 0.0046 (7) | 0.0061 (6) | 0.0024 (7) |
| C6 | 0.0929 (14) | 0.0845 (13) | 0.139 (2) | −0.0182 (11) | 0.0419 (13) | 0.0105 (12) |
| C7 | 0.0633 (8) | 0.0634 (8) | 0.0595 (8) | 0.0033 (7) | 0.0093 (6) | −0.0058 (6) |
| C8 | 0.0743 (10) | 0.0600 (8) | 0.0730 (9) | −0.0017 (7) | 0.0096 (8) | 0.0039 (7) |
| C9 | 0.1260 (17) | 0.0716 (11) | 0.0864 (12) | 0.0159 (11) | 0.0172 (12) | 0.0096 (9) |
| C10 | 0.1089 (15) | 0.0753 (11) | 0.0977 (13) | 0.0020 (10) | 0.0486 (12) | 0.0135 (10) |
| C11 | 0.0982 (15) | 0.1086 (17) | 0.1210 (18) | −0.0325 (13) | −0.0168 (14) | 0.0207 (14) |
| C12 | 0.0441 (6) | 0.0584 (7) | 0.0541 (7) | −0.0037 (5) | 0.0082 (5) | −0.0028 (5) |
| C13 | 0.0649 (8) | 0.0748 (9) | 0.0553 (8) | 0.0084 (7) | 0.0041 (6) | 0.0003 (7) |
| C14 | 0.0628 (8) | 0.0718 (9) | 0.0566 (8) | −0.0045 (7) | 0.0101 (6) | −0.0074 (6) |
| C15 | 0.0643 (9) | 0.0830 (10) | 0.0672 (9) | 0.0103 (8) | 0.0145 (7) | −0.0160 (8) |
| C16 | 0.0574 (8) | 0.0769 (9) | 0.0643 (8) | 0.0125 (7) | 0.0078 (6) | −0.0056 (7) |
| C17 | 0.0947 (13) | 0.1195 (16) | 0.0590 (9) | 0.0039 (12) | 0.0092 (9) | −0.0124 (10) |
| C18 | 0.0479 (7) | 0.0957 (11) | 0.0581 (8) | −0.0060 (7) | 0.0062 (6) | −0.0059 (7) |
| C19 | 0.0574 (8) | 0.1030 (12) | 0.0540 (8) | −0.0056 (8) | 0.0058 (6) | −0.0037 (8) |
| C20 | 0.1021 (15) | 0.1323 (18) | 0.0765 (12) | 0.0172 (14) | 0.0078 (10) | −0.0312 (12) |
| C21 | 0.0894 (13) | 0.161 (2) | 0.0718 (11) | −0.0318 (14) | 0.0046 (10) | 0.0262 (13) |
| C22 | 0.0681 (10) | 0.153 (2) | 0.0636 (10) | −0.0080 (12) | −0.0058 (8) | −0.0082 (11) |
| N1 | 0.0483 (6) | 0.0612 (6) | 0.0649 (7) | 0.0024 (5) | 0.0111 (5) | −0.0014 (5) |
| N2 | 0.0517 (6) | 0.0616 (7) | 0.0612 (6) | 0.0020 (5) | 0.0141 (5) | 0.0003 (5) |
| N3 | 0.0564 (6) | 0.0654 (7) | 0.0555 (6) | 0.0082 (5) | 0.0078 (5) | −0.0030 (5) |
| N4 | 0.0464 (6) | 0.0772 (8) | 0.0526 (6) | 0.0019 (5) | 0.0081 (5) | −0.0045 (5) |
| O1 | 0.1027 (10) | 0.0738 (8) | 0.1127 (10) | 0.0100 (7) | 0.0496 (8) | −0.0114 (7) |
| O2 | 0.0451 (6) | 0.250 (2) | 0.0754 (8) | −0.0005 (9) | 0.0067 (5) | −0.0370 (11) |
| C1—N1 | 1.3269 (18) | C12—C16 | 1.384 (2) |
| C1—C5 | 1.3862 (19) | C12—N4 | 1.4077 (17) |
| C1—N2 | 1.4122 (17) | C13—N3 | 1.3427 (19) |
| C2—N1 | 1.3346 (19) | C13—C14 | 1.378 (2) |
| C2—C3 | 1.382 (2) | C13—H13 | 0.9300 |
| C2—H2 | 0.9300 | C14—C15 | 1.377 (2) |
| C3—C4 | 1.381 (2) | C14—C17 | 1.507 (2) |
| C3—C6 | 1.506 (2) | C15—C16 | 1.380 (2) |
| C4—C5 | 1.368 (2) | C15—H15 | 0.9300 |
| C4—H4 | 0.9300 | C16—H16 | 0.9300 |
| C5—H5 | 0.9300 | C17—H17A | 0.9600 |
| C6—H6A | 0.9600 | C17—H17B | 0.9600 |
| C6—H6B | 0.9600 | C17—H17C | 0.9600 |
| C6—H6C | 0.9600 | C18—O2 | 1.208 (2) |
| C7—O1 | 1.2155 (19) | C18—N4 | 1.3565 (19) |
| C7—N2 | 1.3567 (19) | C18—C19 | 1.527 (2) |
| C7—C8 | 1.531 (2) | C19—C21 | 1.526 (3) |
| C8—C10 | 1.527 (3) | C19—C22 | 1.529 (2) |
| C8—C9 | 1.529 (3) | C19—C20 | 1.531 (3) |
| C8—C11 | 1.531 (3) | C20—H20A | 0.9600 |
| C9—H9A | 0.9600 | C20—H20B | 0.9600 |
| C9—H9B | 0.9600 | C20—H20C | 0.9600 |
| C9—H9C | 0.9600 | C21—H21A | 0.9600 |
| C10—H10A | 0.9600 | C21—H21B | 0.9600 |
| C10—H10B | 0.9600 | C21—H21C | 0.9600 |
| C10—H10C | 0.9600 | C22—H22A | 0.9600 |
| C11—H11A | 0.9600 | C22—H22B | 0.9600 |
| C11—H11B | 0.9600 | C22—H22C | 0.9600 |
| C11—H11C | 0.9600 | N2—H2A | 0.8600 |
| C12—N3 | 1.3314 (18) | N4—H4A | 0.8600 |
| N1—C1—C5 | 122.76 (13) | N3—C13—H13 | 117.7 |
| N1—C1—N2 | 115.06 (11) | C14—C13—H13 | 117.7 |
| C5—C1—N2 | 122.13 (13) | C15—C14—C13 | 116.30 (14) |
| N1—C2—C3 | 125.05 (15) | C15—C14—C17 | 122.08 (15) |
| N1—C2—H2 | 117.5 | C13—C14—C17 | 121.62 (16) |
| C3—C2—H2 | 117.5 | C14—C15—C16 | 120.94 (14) |
| C4—C3—C2 | 116.01 (14) | C14—C15—H15 | 119.5 |
| C4—C3—C6 | 122.73 (16) | C16—C15—H15 | 119.5 |
| C2—C3—C6 | 121.25 (17) | C15—C16—C12 | 118.01 (14) |
| C5—C4—C3 | 120.60 (14) | C15—C16—H16 | 121.0 |
| C5—C4—H4 | 119.7 | C12—C16—H16 | 121.0 |
| C3—C4—H4 | 119.7 | C14—C17—H17A | 109.5 |
| C4—C5—C1 | 118.49 (15) | C14—C17—H17B | 109.5 |
| C4—C5—H5 | 120.8 | H17A—C17—H17B | 109.5 |
| C1—C5—H5 | 120.8 | C14—C17—H17C | 109.5 |
| C3—C6—H6A | 109.5 | H17A—C17—H17C | 109.5 |
| C3—C6—H6B | 109.5 | H17B—C17—H17C | 109.5 |
| H6A—C6—H6B | 109.5 | O2—C18—N4 | 121.25 (14) |
| C3—C6—H6C | 109.5 | O2—C18—C19 | 122.54 (14) |
| H6A—C6—H6C | 109.5 | N4—C18—C19 | 116.20 (13) |
| H6B—C6—H6C | 109.5 | C21—C19—C18 | 109.61 (16) |
| O1—C7—N2 | 121.70 (15) | C21—C19—C22 | 109.63 (17) |
| O1—C7—C8 | 121.50 (15) | C18—C19—C22 | 108.60 (14) |
| N2—C7—C8 | 116.72 (13) | C21—C19—C20 | 109.78 (18) |
| C10—C8—C9 | 108.82 (16) | C18—C19—C20 | 109.45 (16) |
| C10—C8—C11 | 111.11 (19) | C22—C19—C20 | 109.75 (18) |
| C9—C8—C11 | 109.45 (17) | C19—C20—H20A | 109.5 |
| C10—C8—C7 | 113.06 (14) | C19—C20—H20B | 109.5 |
| C9—C8—C7 | 108.31 (15) | H20A—C20—H20B | 109.5 |
| C11—C8—C7 | 106.00 (15) | C19—C20—H20C | 109.5 |
| C8—C9—H9A | 109.5 | H20A—C20—H20C | 109.5 |
| C8—C9—H9B | 109.5 | H20B—C20—H20C | 109.5 |
| H9A—C9—H9B | 109.5 | C19—C21—H21A | 109.5 |
| C8—C9—H9C | 109.5 | C19—C21—H21B | 109.5 |
| H9A—C9—H9C | 109.5 | H21A—C21—H21B | 109.5 |
| H9B—C9—H9C | 109.5 | C19—C21—H21C | 109.5 |
| C8—C10—H10A | 109.5 | H21A—C21—H21C | 109.5 |
| C8—C10—H10B | 109.5 | H21B—C21—H21C | 109.5 |
| H10A—C10—H10B | 109.5 | C19—C22—H22A | 109.5 |
| C8—C10—H10C | 109.5 | C19—C22—H22B | 109.5 |
| H10A—C10—H10C | 109.5 | H22A—C22—H22B | 109.5 |
| H10B—C10—H10C | 109.5 | C19—C22—H22C | 109.5 |
| C8—C11—H11A | 109.5 | H22A—C22—H22C | 109.5 |
| C8—C11—H11B | 109.5 | H22B—C22—H22C | 109.5 |
| H11A—C11—H11B | 109.5 | C1—N1—C2 | 117.08 (12) |
| C8—C11—H11C | 109.5 | C7—N2—C1 | 124.47 (12) |
| H11A—C11—H11C | 109.5 | C7—N2—H2A | 117.8 |
| H11B—C11—H11C | 109.5 | C1—N2—H2A | 117.8 |
| N3—C12—C16 | 122.75 (13) | C12—N3—C13 | 117.35 (12) |
| N3—C12—N4 | 113.83 (11) | C18—N4—C12 | 125.79 (12) |
| C16—C12—N4 | 123.38 (13) | C18—N4—H4A | 117.1 |
| N3—C13—C14 | 124.64 (14) | C12—N4—H4A | 117.1 |
| N1—C2—C3—C4 | −0.6 (3) | O2—C18—C19—C21 | 119.0 (2) |
| N1—C2—C3—C6 | −179.97 (18) | N4—C18—C19—C21 | −61.9 (2) |
| C2—C3—C4—C5 | 0.2 (2) | O2—C18—C19—C22 | −0.8 (3) |
| C6—C3—C4—C5 | 179.56 (18) | N4—C18—C19—C22 | 178.35 (18) |
| C3—C4—C5—C1 | 0.3 (2) | O2—C18—C19—C20 | −120.6 (2) |
| N1—C1—C5—C4 | −0.3 (2) | N4—C18—C19—C20 | 58.5 (2) |
| N2—C1—C5—C4 | −177.72 (14) | C5—C1—N1—C2 | 0.0 (2) |
| O1—C7—C8—C10 | 151.67 (19) | N2—C1—N1—C2 | 177.54 (12) |
| N2—C7—C8—C10 | −31.6 (2) | C3—C2—N1—C1 | 0.5 (2) |
| O1—C7—C8—C9 | 31.0 (2) | O1—C7—N2—C1 | −0.2 (2) |
| N2—C7—C8—C9 | −152.30 (15) | C8—C7—N2—C1 | −176.94 (13) |
| O1—C7—C8—C11 | −86.4 (2) | N1—C1—N2—C7 | 142.20 (14) |
| N2—C7—C8—C11 | 90.33 (19) | C5—C1—N2—C7 | −40.2 (2) |
| N3—C13—C14—C15 | −1.3 (3) | C16—C12—N3—C13 | 0.6 (2) |
| N3—C13—C14—C17 | 177.95 (17) | N4—C12—N3—C13 | 178.41 (13) |
| C13—C14—C15—C16 | 0.9 (3) | C14—C13—N3—C12 | 0.5 (2) |
| C17—C14—C15—C16 | −178.27 (18) | O2—C18—N4—C12 | 0.7 (3) |
| C14—C15—C16—C12 | 0.1 (3) | C19—C18—N4—C12 | −178.44 (15) |
| N3—C12—C16—C15 | −0.9 (2) | N3—C12—N4—C18 | 148.58 (15) |
| N4—C12—C16—C15 | −178.46 (15) | C16—C12—N4—C18 | −33.7 (2) |
| H··· | ||||
| N2—H2 | 0.86 | 2.31 | 3.1192 (16) | 156 |
| N4—H4 | 0.86 | 2.25 | 3.0837 (16) | 163 |
| C4—H4···O2i | 0.93 | 2.43 | 3.3262 (19) | 160 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2 | 0.86 | 2.31 | 3.1192(16) | 156 |
| N4H4 | 0.86 | 2.25 | 3.0837(16) | 163 |
| C4H4O2i | 0.93 | 2.43 | 3.3262(19) | 160 |
Symmetry code: (i) .